<HashMap><database>biostudies-literature</database><scores/><additional><omics_type>Unknown</omics_type><submitter>Landoulsi Z</submitter><funding>Intramural NIH HHS</funding><funding>NIA NIH HHS</funding><funding>NIEHS NIH HHS</funding><pubmed_abstract>&lt;h4>Objective&lt;/h4>Our study investigates the impact of copy number variations (CNVs) on Parkinson's disease (PD) pathogenesis using genome-wide data, aiming to uncover novel genetic mechanisms and improve the understanding of the role of CNVs in sporadic PD.&lt;h4>Methods&lt;/h4>We applied a sliding window approach to perform CNV-GWAS and conducted genome-wide burden analyses on CNV data from 11,035 PD patients (including 2,731 early-onset PD (EOPD)) and 8,901 controls from the COURAGE-PD consortium.&lt;h4>Results&lt;/h4>We identified 14 genome-wide significant CNV loci associated with PD, including one deletion and 13 duplications. Among these, duplications in 7q22.1, 11q12.3 and 7q33 displayed the highest effect. Two significant duplications overlapped with PD-related genes &lt;i>SNCA&lt;/i> and &lt;i>VPS13C</pubmed_abstract><journal>medRxiv : the preprint server for health sciences</journal><pagination>2024.08.21.24311915</pagination><full_dataset_link>https://www.ebi.ac.uk/biostudies/studies/S-EPMC11370542</full_dataset_link><repository>biostudies-literature</repository><pubmed_title>Genome-wide association study of copy number variations in Parkinson's disease.</pubmed_title><pmcid>PMC11370542</pmcid><funding_grant_id>Z01 AG000949</funding_grant_id><funding_grant_id>R01 AG008724</funding_grant_id><funding_grant_id>R01 ES010758</funding_grant_id><pubmed_authors>Dardiotis E</pubmed_authors><pubmed_authors>Matsuo H</pubmed_authors><pubmed_authors>Pihlstrom L</pubmed_authors><pubmed_authors>Tolosa E</pubmed_authors><pubmed_authors>Mellick GD</pubmed_authors><pubmed_authors>Lal D</pubmed_authors><pubmed_authors>Hernandez DG</pubmed_authors><pubmed_authors>Carr J</pubmed_authors><pubmed_authors>Gasser T</pubmed_authors><pubmed_authors>Nishioka K</pubmed_authors><pubmed_authors>Clarke CE</pubmed_authors><pubmed_authors>Chartier-Harlin MC</pubmed_authors><pubmed_authors>Edsall C</pubmed_authors><pubmed_authors>Ezquerra M</pubmed_authors><pubmed_authors>Belin AC</pubmed_authors><pubmed_authors>Niestroj LM</pubmed_authors><pubmed_authors>Rogaeva E</pubmed_authors><pubmed_authors>Tan M</pubmed_authors><pubmed_authors>Montanucci L</pubmed_authors><pubmed_authors>Brice A</pubmed_authors><pubmed_authors>Sharma M</pubmed_authors><pubmed_authors>Farrer MJ</pubmed_authors><pubmed_authors>Pezzoli G</pubmed_authors><pubmed_authors>Kru Ger J</pubmed_authors><pubmed_authors>Bobbili DR</pubmed_authors><pubmed_authors>Toft M</pubmed_authors><pubmed_authors>Corvol JC</pubmed_authors><pubmed_authors>Portugal B</pubmed_authors><pubmed_authors>Valente EM</pubmed_authors><pubmed_authors>Kolber P</pubmed_authors><pubmed_authors>Guedes LC</pubmed_authors><pubmed_authors>Pavelka L</pubmed_authors><pubmed_authors>Mutez E</pubmed_authors><pubmed_authors>Gagliardi M</pubmed_authors><pubmed_authors>Leu C</pubmed_authors><pubmed_authors>Ferrarese C</pubmed_authors><pubmed_authors>Sreelatha AAK</pubmed_authors><pubmed_authors>Hadjigeorgiou GM</pubmed_authors><pubmed_authors>Lesage S</pubmed_authors><pubmed_authors>Nakayama A</pubmed_authors><pubmed_authors>van de Warrenburg BP</pubmed_authors><pubmed_authors>Blauwendraat C</pubmed_authors><pubmed_authors>Stefanis L</pubmed_authors><pubmed_authors>Bardien S</pubmed_authors><pubmed_authors>Wirdefeldt K</pubmed_authors><pubmed_authors>Sugier PE</pubmed_authors><pubmed_authors>Landoulsi Z</pubmed_authors><pubmed_authors>Ran C</pubmed_authors><pubmed_authors>Zimprich A</pubmed_authors><pubmed_authors>Straniero L</pubmed_authors><pubmed_authors>Morrison KE</pubmed_authors><pubmed_authors>Zecchinelli A</pubmed_authors><pubmed_authors>Annesi G</pubmed_authors><pubmed_authors>Chung SJ</pubmed_authors><pubmed_authors>Koks S</pubmed_authors><pubmed_authors>Brockmann K</pubmed_authors><pubmed_authors>Kim YJ</pubmed_authors><pubmed_authors>Pedersen NL</pubmed_authors><pubmed_authors>Ferreira JJ</pubmed_authors><pubmed_authors>Burbulla LF</pubmed_authors><pubmed_authors>Pirker W</pubmed_authors><pubmed_authors>Hassanin E</pubmed_authors><pubmed_authors>May P</pubmed_authors><pubmed_authors>Singleton AB</pubmed_authors><pubmed_authors>Puschmann A</pubmed_authors><pubmed_authors>Taba P</pubmed_authors><pubmed_authors>Radivojkov-Blagojevic M</pubmed_authors><pubmed_authors>Lang AE</pubmed_authors><pubmed_authors>Pastor P</pubmed_authors><pubmed_authors>Domenighetti C</pubmed_authors><pubmed_authors>Petrucci S</pubmed_authors><pubmed_authors>Lichtner P</pubmed_authors><pubmed_authors>Simitsi AM</pubmed_authors><pubmed_authors>Brighina L</pubmed_authors><pubmed_authors>Deutschlander AB</pubmed_authors><pubmed_authors>Krainc D</pubmed_authors><pubmed_authors>Schulte C</pubmed_authors><pubmed_authors>Kruger R</pubmed_authors><pubmed_authors>Elbaz A</pubmed_authors><pubmed_authors>Bloem BR</pubmed_authors><pubmed_authors>Quattrone A</pubmed_authors><pubmed_authors>Hattori N</pubmed_authors></additional><is_claimable>false</is_claimable><name>Genome-wide association study of copy number variations in Parkinson's disease.</name><description>&lt;h4>Objective&lt;/h4>Our study investigates the impact of copy number variations (CNVs) on Parkinson's disease (PD) pathogenesis using genome-wide data, aiming to uncover novel genetic mechanisms and improve the understanding of the role of CNVs in sporadic PD.&lt;h4>Methods&lt;/h4>We applied a sliding window approach to perform CNV-GWAS and conducted genome-wide burden analyses on CNV data from 11,035 PD patients (including 2,731 early-onset PD (EOPD)) and 8,901 controls from the COURAGE-PD consortium.&lt;h4>Results&lt;/h4>We identified 14 genome-wide significant CNV loci associated with PD, including one deletion and 13 duplications. Among these, duplications in 7q22.1, 11q12.3 and 7q33 displayed the highest effect. Two significant duplications overlapped with PD-related genes &lt;i>SNCA&lt;/i> and &lt;i>VPS13C</description><dates><release>2024-01-01T00:00:00Z</release><publication>2024 Aug</publication><modification>2026-05-28T03:14:00.741Z</modification><creation>2025-04-06T10:13:51.323Z</creation></dates><accession>S-EPMC11370542</accession><cross_references><pubmed>39228715</pubmed><doi>10.1101/2024.08.21.24311915</doi></cross_references></HashMap>