<HashMap><database>biostudies-literature</database><scores/><additional><omics_type>Unknown</omics_type><submitter>Jules E</submitter><funding>NIBIB NIH HHS</funding><funding>NCATS NIH HHS</funding><pubmed_abstract>Genomic epidemiology offers important insight into the transmission and evolution of respiratory viruses. We used metagenomic sequencing from negative SARS-CoV-2 antigen tests to identify a wide range of respiratory viruses and generate full genome sequences, offering a streamlined mechanism for broad respiratory virus genomic surveillance.</pubmed_abstract><journal>medRxiv : the preprint server for health sciences</journal><pagination>2024.08.19.24311993</pagination><full_dataset_link>https://www.ebi.ac.uk/biostudies/studies/S-EPMC11370544</full_dataset_link><repository>biostudies-literature</repository><pubmed_title>Respiratory virus detection and sequencing from negative SARS-CoV-2 rapid antigen tests.</pubmed_title><pmcid>PMC11370544</pmcid><funding_grant_id>UL1 TR002378</funding_grant_id><funding_grant_id>U54 EB027690</funding_grant_id><pubmed_authors>Greenleaf M</pubmed_authors><pubmed_authors>Jules E</pubmed_authors><pubmed_authors>Ingersoll J</pubmed_authors><pubmed_authors>Tafesse H</pubmed_authors><pubmed_authors>Frediani JK</pubmed_authors><pubmed_authors>Dakanay H</pubmed_authors><pubmed_authors>Wang E</pubmed_authors><pubmed_authors>Sullivan J</pubmed_authors><pubmed_authors>Martin GS</pubmed_authors><pubmed_authors>Lam WA</pubmed_authors><pubmed_authors>Bifulco K</pubmed_authors><pubmed_authors>Zhou ZC</pubmed_authors><pubmed_authors>Waggoner JJ</pubmed_authors><pubmed_authors>Decker C</pubmed_authors><pubmed_authors>Piantadosi A</pubmed_authors><pubmed_authors>Arora I</pubmed_authors><pubmed_authors>Bixler BJ</pubmed_authors><pubmed_authors>Ahmed A</pubmed_authors><pubmed_authors>Parsons R</pubmed_authors><pubmed_authors>Bombin A</pubmed_authors></additional><is_claimable>false</is_claimable><name>Respiratory virus detection and sequencing from negative SARS-CoV-2 rapid antigen tests.</name><description>Genomic epidemiology offers important insight into the transmission and evolution of respiratory viruses. We used metagenomic sequencing from negative SARS-CoV-2 antigen tests to identify a wide range of respiratory viruses and generate full genome sequences, offering a streamlined mechanism for broad respiratory virus genomic surveillance.</description><dates><release>2024-01-01T00:00:00Z</release><publication>2024 Aug</publication><modification>2026-05-28T03:15:17.739Z</modification><creation>2025-04-04T02:57:40.67Z</creation></dates><accession>S-EPMC11370544</accession><cross_references><pubmed>39228743</pubmed><doi>10.1101/2024.08.19.24311993</doi></cross_references></HashMap>