{"database":"biostudies-literature","file_versions":[],"scores":null,"additional":{"submitter":["Mao F"],"funding":["Major Special Project of Fujian, Natural Science Foundation of Fujian, National Natural Science Foundation of China and 2020 Award Program for Min River Scholar in Fujian"],"pagination":["9798"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/S-EPMC11432187"],"repository":["biostudies-literature"],"omics_type":["Unknown"],"volume":["25(18)"],"pubmed_abstract":["Pearl millet is a major cereal crop that feeds more than 90 million people worldwide in arid and semi-arid regions. The stalk phenotypes of Poaceous grasses are critical for their productivity and stress tolerance; however, the molecular mechanisms governing stalk development in pearl millet remain to be deciphered. In this study, we spatiotemporally measured 19 transcriptomes for stalk internodes of four different early developmental stages. Data analysis of the transcriptomes defined four developmental zones on the stalks and identified 12 specific gene sets with specific expression patterns across the zones. Using weighted gene co-expression network analysis (WGCNA), we found that two co-expression modules together with candidate genes were involved in stalk elongation and the thickenin"],"journal":["International journal of molecular sciences"],"pubmed_title":["A Spatiotemporal Transcriptome Reveals Stalk Development in Pearl Millet."],"pmcid":["PMC11432187"],"funding_grant_id":["2021NZ029009, 2022J06017, 32170554, 32370582"],"pubmed_authors":["Shao E","Cao M","Ma N","Zhu F","Mao F","Chen H","Lin Z","Qu Q","Lu G","Lin D","Luo L","Yi C","Lin H"],"additional_accession":[]},"is_claimable":false,"name":"A Spatiotemporal Transcriptome Reveals Stalk Development in Pearl Millet.","description":"Pearl millet is a major cereal crop that feeds more than 90 million people worldwide in arid and semi-arid regions. The stalk phenotypes of Poaceous grasses are critical for their productivity and stress tolerance; however, the molecular mechanisms governing stalk development in pearl millet remain to be deciphered. In this study, we spatiotemporally measured 19 transcriptomes for stalk internodes of four different early developmental stages. Data analysis of the transcriptomes defined four developmental zones on the stalks and identified 12 specific gene sets with specific expression patterns across the zones. Using weighted gene co-expression network analysis (WGCNA), we found that two co-expression modules together with candidate genes were involved in stalk elongation and the thickenin","dates":{"release":"2024-01-01T00:00:00Z","publication":"2024 Sep","modification":"2025-04-26T08:43:25.275Z","creation":"2025-04-06T12:50:12.989Z"},"accession":"S-EPMC11432187","cross_references":{"pubmed":["39337286"],"doi":["10.3390/ijms25189798"]}}