{"database":"biostudies-literature","file_versions":[],"scores":null,"additional":{"submitter":["Kimura T"],"funding":["Exploratory Research for Advanced Technology","Japan Agency for Medical Research and Development","Japan Society for the Promotion of Science"],"pagination":["769-781"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/S-EPMC11448003"],"repository":["biostudies-literature"],"omics_type":["Unknown"],"volume":["29(9)"],"pubmed_abstract":["The Lys mutation of the canonical histone H3.1 Glu97 residue (H3E97K) is found in cancer cells. Previous biochemical analyses revealed that the nucleosome containing the H3E97K mutation is extremely unstable as compared to the wild-type nucleosome. However, the mechanism by which the H3E97K mutation causes nucleosome instability has not been clarified yet. In the present study, the cryo-electron microscopy structure of the nucleosome containing the H3E97K mutation revealed that the entry/exit DNA regions of the H3E97K nucleosome are disordered, probably by detachment of the nucleosomal DNA from the H3 N-terminal regions. This may change the intra-molecular amino acid interactions with the replaced H3 Lys97 residue, inducing structural distortion around the mutated position in the nucleosom"],"journal":["Genes to cells : devoted to molecular & cellular mechanisms"],"pubmed_title":["Cryo-EM structure and biochemical analyses of the nucleosome containing the cancer-associated histone H3 mutation E97K."],"pmcid":["PMC11448003"],"funding_grant_id":["JP20H03201","JP22K15033","JP24H02328","JP22KJ0858","JPMJER1901","JP20H05690","JP23H05475","JP22K06098","JP24ama121009","JP23K17392"],"pubmed_authors":["Ogasawara M","Kimura T","Sekine SI","Takizawa Y","Fujita R","Ehara H","Kurumizaka H","Hirai S","Kujirai T"],"additional_accession":[]},"is_claimable":false,"name":"Cryo-EM structure and biochemical analyses of the nucleosome containing the cancer-associated histone H3 mutation E97K.","description":"The Lys mutation of the canonical histone H3.1 Glu97 residue (H3E97K) is found in cancer cells. Previous biochemical analyses revealed that the nucleosome containing the H3E97K mutation is extremely unstable as compared to the wild-type nucleosome. However, the mechanism by which the H3E97K mutation causes nucleosome instability has not been clarified yet. In the present study, the cryo-electron microscopy structure of the nucleosome containing the H3E97K mutation revealed that the entry/exit DNA regions of the H3E97K nucleosome are disordered, probably by detachment of the nucleosomal DNA from the H3 N-terminal regions. This may change the intra-molecular amino acid interactions with the replaced H3 Lys97 residue, inducing structural distortion around the mutated position in the nucleosom","dates":{"release":"2024-01-01T00:00:00Z","publication":"2024 Sep","modification":"2026-06-15T06:21:31.202Z","creation":"2025-04-04T02:20:34.189Z"},"accession":"S-EPMC11448003","cross_references":{"pubmed":["38972377"],"doi":["10.1111/gtc.13143"]}}