{"database":"biostudies-literature","file_versions":[],"scores":null,"additional":{"omics_type":["Unknown"],"volume":["65"],"submitter":["Luo H"],"pubmed_abstract":["<h4>Introduction</h4>Golden pompano (Trachinotus ovatus) is economically significant important for offshore cage aquaculture in China and Southeast Asian countries. Lack of high-quality genomic data and accurate gene annotations greatly restricts its genetic breeding progress.<h4>Objectives</h4>To decode the mechanisms of sex determination and rapid growth in golden pompano and facilitate the sex- and growth-aimed genetic breeding.<h4>Methods</h4>Genome assemblies of male and female golden pompano were generated using Illumina, PacBio, BioNano, genetic maps and Hi-C sequencing data. Genomic comparisons, whole genome re-sequencing of 202 F1 individuals, QTL mapping and gonadal transcriptomes were used to analyze the sex determining region, sex chromosome evolution, SNP loci, and growth cand"],"journal":["Journal of advanced research"],"pagination":["1-17"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/S-EPMC11518962"],"repository":["biostudies-literature"],"pubmed_title":["The male and female genomes of golden pompano (Trachinotus ovatus) provide insights into the sex chromosome evolution and rapid growth."],"pmcid":["PMC11518962"],"pubmed_authors":["Liu H","Ji C","Zhang J","Qin J","Zhou S","Liu Q","Ma Z","Lin Y","Luo H","Yang C","Zhao Z","Zhao Y","He P","Wei P","Zheng H","Huang Y","Dai S","Zhang Y","Chen X","Liu F","Peng J","Feng P","Xu Y"],"additional_accession":[]},"is_claimable":false,"name":"The male and female genomes of golden pompano (Trachinotus ovatus) provide insights into the sex chromosome evolution and rapid growth.","description":"<h4>Introduction</h4>Golden pompano (Trachinotus ovatus) is economically significant important for offshore cage aquaculture in China and Southeast Asian countries. Lack of high-quality genomic data and accurate gene annotations greatly restricts its genetic breeding progress.<h4>Objectives</h4>To decode the mechanisms of sex determination and rapid growth in golden pompano and facilitate the sex- and growth-aimed genetic breeding.<h4>Methods</h4>Genome assemblies of male and female golden pompano were generated using Illumina, PacBio, BioNano, genetic maps and Hi-C sequencing data. Genomic comparisons, whole genome re-sequencing of 202 F1 individuals, QTL mapping and gonadal transcriptomes were used to analyze the sex determining region, sex chromosome evolution, SNP loci, and growth cand","dates":{"release":"2024-01-01T00:00:00Z","publication":"2024 Nov","modification":"2026-04-08T18:36:46.702Z","creation":"2025-04-06T14:23:39.276Z"},"accession":"S-EPMC11518962","cross_references":{"pubmed":["38043610"],"doi":["10.1016/j.jare.2023.11.030"]}}