{"database":"biostudies-literature","file_versions":[],"scores":null,"additional":{"omics_type":["Unknown"],"volume":["24(1)"],"submitter":["Zhang J"],"pubmed_abstract":["<h4>Background</h4>Habenaria, a genus in the family Orchidaceae, are the nearly cosmopolitan orchids, and most species have significant medicinal and ornamental values. Despite the morphological and molecular data that have been studied in recent years, the phylogenetic relationship is still unclear.<h4>Results</h4>We sequenced, assembled, and annotated the chloroplast (cp) genomes of two species (Habenaria aitchisonii Rchb.f. and Habenaria tibetica Schltr.ex Limpricht) of Habenaria grown on the Qinghai-Tibetan Plateau (QTP), and compared them with seven previously published cp genomes which may aid in the genomic profiling of these species. The two genomes ranged from 155,259-155,269 bp in length and both included 132 genes, encoding 86 proteins, 38 tRNAs and 8 rRNAs. In the cp genomes, t"],"journal":["BMC plant biology"],"pagination":["1046"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/S-EPMC11536600"],"repository":["biostudies-literature"],"pubmed_title":["Comparison of the chloroplast genomics of nine endangered Habenaria species and phylogenetic analysis."],"pmcid":["PMC11536600"],"pubmed_authors":["Wang M","Lin P","Zhao S","Zhang J","Shi S","Chen W","Zhou D","Mehmood F","Zhuang W","Wang H","Meng J","Ye X"],"additional_accession":[]},"is_claimable":false,"name":"Comparison of the chloroplast genomics of nine endangered Habenaria species and phylogenetic analysis.","description":"<h4>Background</h4>Habenaria, a genus in the family Orchidaceae, are the nearly cosmopolitan orchids, and most species have significant medicinal and ornamental values. Despite the morphological and molecular data that have been studied in recent years, the phylogenetic relationship is still unclear.<h4>Results</h4>We sequenced, assembled, and annotated the chloroplast (cp) genomes of two species (Habenaria aitchisonii Rchb.f. and Habenaria tibetica Schltr.ex Limpricht) of Habenaria grown on the Qinghai-Tibetan Plateau (QTP), and compared them with seven previously published cp genomes which may aid in the genomic profiling of these species. The two genomes ranged from 155,259-155,269 bp in length and both included 132 genes, encoding 86 proteins, 38 tRNAs and 8 rRNAs. In the cp genomes, t","dates":{"release":"2024-01-01T00:00:00Z","publication":"2024 Nov","modification":"2026-06-01T20:31:58.296Z","creation":"2025-04-04T11:43:09.072Z"},"accession":"S-EPMC11536600","cross_references":{"pubmed":["39497089"],"doi":["10.1186/s12870-024-05766-2"]}}