<HashMap><database>biostudies-literature</database><scores/><additional><omics_type>Unknown</omics_type><submitter>He Z</submitter><funding>NIAMS NIH HHS</funding><pubmed_abstract>Some autoimmune diseases, including rheumatoid arthritis (RA), are preceded by a critical subclinical phase of disease activity. Proactive clinical management is hampered by a lack of biological understanding of this subclinical 'at-risk' state and the changes underlying disease development. In a cross-sectional and longitudinal multi-omics study of peripheral immunity in the autoantibody-positive at-risk for RA period, we identified systemic inflammation, proinflammatory-skewed B cells, expanded Tfh17-like cells, epigenetic bias in naive T cells, TNF+IL1B+ monocytes resembling a synovial macrophage population, and CD4 T cell transcriptional features resembling those suppressed by abatacept (CTLA4-Ig) in RA patients. Our findings characterize pathogenesis prior to clinical diagnosis and su</pubmed_abstract><journal>bioRxiv : the preprint server for biology</journal><pagination>2024.10.25.620344</pagination><full_dataset_link>https://www.ebi.ac.uk/biostudies/studies/S-EPMC11565773</full_dataset_link><repository>biostudies-literature</repository><pubmed_title>Systemic inflammation and lymphocyte activation precede rheumatoid arthritis.</pubmed_title><pmcid>PMC11565773</pmcid><funding_grant_id>P30 AR079369</funding_grant_id><pubmed_authors>Zhang F</pubmed_authors><pubmed_authors>Asamoah AG</pubmed_authors><pubmed_authors>Mettey RR</pubmed_authors><pubmed_authors>Zaim SR</pubmed_authors><pubmed_authors>Peng T</pubmed_authors><pubmed_authors>Graybuck LT</pubmed_authors><pubmed_authors>Reading J</pubmed_authors><pubmed_authors>Li XJ</pubmed_authors><pubmed_authors>Swanson EG</pubmed_authors><pubmed_authors>Parthasarathy V</pubmed_authors><pubmed_authors>Garber J</pubmed_authors><pubmed_authors>Ochoa A</pubmed_authors><pubmed_authors>Collora CE</pubmed_authors><pubmed_authors>Genge PC</pubmed_authors><pubmed_authors>Kuan EL</pubmed_authors><pubmed_authors>Feser ML</pubmed_authors><pubmed_authors>Boyle DL</pubmed_authors><pubmed_authors>Wang W</pubmed_authors><pubmed_authors>Venkatesan P</pubmed_authors><pubmed_authors>Firestein GS</pubmed_authors><pubmed_authors>Gillespie MA</pubmed_authors><pubmed_authors>Roll CR</pubmed_authors><pubmed_authors>Okada LY</pubmed_authors><pubmed_authors>Krishnan U</pubmed_authors><pubmed_authors>Heubeck AT</pubmed_authors><pubmed_authors>Fleischer CL</pubmed_authors><pubmed_authors>Li R</pubmed_authors><pubmed_authors>Goldrath AW</pubmed_authors><pubmed_authors>Westermann A</pubmed_authors><pubmed_authors>LaFrance CM</pubmed_authors><pubmed_authors>Tsaltskan V</pubmed_authors><pubmed_authors>Savage AK</pubmed_authors><pubmed_authors>Takada H</pubmed_authors><pubmed_authors>He Z</pubmed_authors><pubmed_authors>Hattel BC</pubmed_authors><pubmed_authors>Holers VM</pubmed_authors><pubmed_authors>Becker LA</pubmed_authors><pubmed_authors>Buckner JH</pubmed_authors><pubmed_authors>Gong Q</pubmed_authors><pubmed_authors>Stuckey TJ</pubmed_authors><pubmed_authors>Ravisankar P</pubmed_authors><pubmed_authors>He YD</pubmed_authors><pubmed_authors>Speake C</pubmed_authors><pubmed_authors>Thai T</pubmed_authors><pubmed_authors>Striebich CC</pubmed_authors><pubmed_authors>Torgerson TR</pubmed_authors><pubmed_authors>Pedrick C</pubmed_authors><pubmed_authors>Demoruelle MK</pubmed_authors><pubmed_authors>Pebworth MP</pubmed_authors><pubmed_authors>Barzideh S</pubmed_authors><pubmed_authors>Gustafson CE</pubmed_authors><pubmed_authors>Hernandez V</pubmed_authors><pubmed_authors>Kuhn KA</pubmed_authors><pubmed_authors>Trieu N</pubmed_authors><pubmed_authors>Seifert JA</pubmed_authors><pubmed_authors>Skene PJ</pubmed_authors><pubmed_authors>Deane KD</pubmed_authors><pubmed_authors>Siedschlag MD</pubmed_authors><pubmed_authors>Musgrove B</pubmed_authors><pubmed_authors>Thomson ZJ</pubmed_authors><pubmed_authors>Arishi NA</pubmed_authors><pubmed_authors>Nguyen K</pubmed_authors><pubmed_authors>Weiss MDA</pubmed_authors><pubmed_authors>Bennett CE</pubmed_authors><pubmed_authors>Bumol TF</pubmed_authors><pubmed_authors>Dornisch EM</pubmed_authors><pubmed_authors>Lazaro L</pubmed_authors><pubmed_authors>Tran NTT</pubmed_authors><pubmed_authors>Bemis EA</pubmed_authors><pubmed_authors>Glass MC</pubmed_authors><pubmed_authors>Lord C</pubmed_authors><pubmed_authors>Moss L</pubmed_authors><pubmed_authors>Kawelo EK</pubmed_authors><pubmed_authors>Lee KJ</pubmed_authors><pubmed_authors>Criley MAL</pubmed_authors><pubmed_authors>Phalen CG</pubmed_authors></additional><is_claimable>false</is_claimable><name>Systemic inflammation and lymphocyte activation precede rheumatoid arthritis.</name><description>Some autoimmune diseases, including rheumatoid arthritis (RA), are preceded by a critical subclinical phase of disease activity. Proactive clinical management is hampered by a lack of biological understanding of this subclinical 'at-risk' state and the changes underlying disease development. In a cross-sectional and longitudinal multi-omics study of peripheral immunity in the autoantibody-positive at-risk for RA period, we identified systemic inflammation, proinflammatory-skewed B cells, expanded Tfh17-like cells, epigenetic bias in naive T cells, TNF+IL1B+ monocytes resembling a synovial macrophage population, and CD4 T cell transcriptional features resembling those suppressed by abatacept (CTLA4-Ig) in RA patients. Our findings characterize pathogenesis prior to clinical diagnosis and su</description><dates><release>2024-01-01T00:00:00Z</release><publication>2024 Nov</publication><modification>2026-05-28T03:25:37.563Z</modification><creation>2025-04-04T02:47:47.154Z</creation></dates><accession>S-EPMC11565773</accession><cross_references><pubmed>39554042</pubmed><doi>10.1101/2024.10.25.620344</doi></cross_references></HashMap>