{"database":"biostudies-literature","file_versions":[],"scores":null,"additional":{"omics_type":["Unknown"],"volume":["9(11)"],"submitter":["Luan L"],"funding":["] to Yun-Dong Gao","the National Natural Science Foundation of China [NSFC Grant No."],"pubmed_abstract":["<i>Lilium paradoxum</i>, a herb from southeastern Xizang, China, has its first complete chloroplast genome sequenced using next-generation sequencing. The genome is 151,814 bp, consisting of inverted repeats (IRs; 26,323 bp), small single-copy (SSC; 17,524 bp), and large single-copy regions (LSC; 81,644 bp). It encodes 112 unique genes: 78 protein-coding, 30 tRNA, and 4 rRNA genes. Phylogenetic analysis of 22 genomes shows <i>L. paradoxum</i> is closely related to <i>L. gongshanense, L. apertum,</i> and <i>L. souliei</i>. These findings enhance understanding of <i>Lilium</i>'s phylogenetic relationships and evolution, particularly the Nomocharis clade in the Hengduan Mountains."],"journal":["Mitochondrial DNA. Part B, Resources"],"pagination":["1596-1600"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/S-EPMC11587729"],"repository":["biostudies-literature"],"pubmed_title":["The complete chloroplast genome of <i>Lilium paradoxum</i> Stearn (Liliaceae) from southwestern China."],"pmcid":["PMC11587729"],"pubmed_authors":["Yuan YM","Jiang YL","Ma JH","Gao YD","He QL","Luan L","Wang YX"],"additional_accession":[]},"is_claimable":false,"name":"The complete chloroplast genome of <i>Lilium paradoxum</i> Stearn (Liliaceae) from southwestern China.","description":"<i>Lilium paradoxum</i>, a herb from southeastern Xizang, China, has its first complete chloroplast genome sequenced using next-generation sequencing. The genome is 151,814 bp, consisting of inverted repeats (IRs; 26,323 bp), small single-copy (SSC; 17,524 bp), and large single-copy regions (LSC; 81,644 bp). It encodes 112 unique genes: 78 protein-coding, 30 tRNA, and 4 rRNA genes. Phylogenetic analysis of 22 genomes shows <i>L. paradoxum</i> is closely related to <i>L. gongshanense, L. apertum,</i> and <i>L. souliei</i>. These findings enhance understanding of <i>Lilium</i>'s phylogenetic relationships and evolution, particularly the Nomocharis clade in the Hengduan Mountains.","dates":{"release":"2024-01-01T00:00:00Z","publication":"2024","modification":"2026-06-01T13:23:36.909Z","creation":"2025-04-04T22:47:31.937Z"},"accession":"S-EPMC11587729","cross_references":{"pubmed":["39588496"],"doi":["10.1080/23802359.2024.2432367"]}}