<HashMap><database>biostudies-literature</database><scores/><additional><submitter>Yamada HY</submitter><funding>U.S. Department of Health &amp; Human Services | NIH | National Cancer Institute (NCI)</funding><funding>American Cancer Society (American Cancer Society, Inc.)</funding><funding>NCI NIH HHS</funding><funding>NIGMS NIH HHS</funding><pagination>288</pagination><full_dataset_link>https://www.ebi.ac.uk/biostudies/studies/S-EPMC11666716</full_dataset_link><repository>biostudies-literature</repository><omics_type>Unknown</omics_type><volume>8(1)</volume><pubmed_abstract>The high incidence and mortality rates of colorectal cancer (CRC) in Alabama African Americans (AAs) and Oklahoma American Indians (AIs) are recognized as cancer disparities, yet the underlying causes have been poorly demonstrated. By evaluating CRC whole-exome sequencing and mutational profiles, here we report sets of mutated genes whose frequencies differed significantly (p &lt; 0.05) in a race-specific manner. Secondary screening with cancer database identified "survival-critical genes (SCGs)" (i.e., genes whose mutations/alterations are associated with significant differences in the patients' survival rates) among the differentially mutated genes. Notable SCGs with race-pronounced variants were different from DEGs and their involved pathways included nucleotide catabolism and cell cycle c</pubmed_abstract><journal>NPJ precision oncology</journal><pubmed_title>Mutational disparities in colorectal cancers of White Americans, Alabama African Americans, And Oklahoma American Indians.</pubmed_title><pmcid>PMC11666716</pmcid><funding_grant_id>9 R01 CA 213987-05S1</funding_grant_id><funding_grant_id>MRSG 15-136-01-CCE</funding_grant_id><funding_grant_id>U54 CA118948</funding_grant_id><funding_grant_id>P20 GM103447</funding_grant_id><funding_grant_id>P30 CA225520</funding_grant_id><funding_grant_id>R01 CA213987</funding_grant_id><funding_grant_id>P20GM103639</funding_grant_id><funding_grant_id>5U54CA118948</funding_grant_id><funding_grant_id>P20 GM103639</funding_grant_id><pubmed_authors>Manne U</pubmed_authors><pubmed_authors>Rao CV</pubmed_authors><pubmed_authors>O'Neill PH</pubmed_authors><pubmed_authors>Rout M</pubmed_authors><pubmed_authors>Xu C</pubmed_authors><pubmed_authors>Sanghera DK</pubmed_authors><pubmed_authors>Afaq F</pubmed_authors><pubmed_authors>Morris KT</pubmed_authors><pubmed_authors>Yamada HY</pubmed_authors></additional><is_claimable>false</is_claimable><name>Mutational disparities in colorectal cancers of White Americans, Alabama African Americans, And Oklahoma American Indians.</name><description>The high incidence and mortality rates of colorectal cancer (CRC) in Alabama African Americans (AAs) and Oklahoma American Indians (AIs) are recognized as cancer disparities, yet the underlying causes have been poorly demonstrated. By evaluating CRC whole-exome sequencing and mutational profiles, here we report sets of mutated genes whose frequencies differed significantly (p &lt; 0.05) in a race-specific manner. Secondary screening with cancer database identified "survival-critical genes (SCGs)" (i.e., genes whose mutations/alterations are associated with significant differences in the patients' survival rates) among the differentially mutated genes. Notable SCGs with race-pronounced variants were different from DEGs and their involved pathways included nucleotide catabolism and cell cycle c</description><dates><release>2024-01-01T00:00:00Z</release><publication>2024 Dec</publication><modification>2026-06-01T23:07:23.773Z</modification><creation>2025-04-07T13:36:48.279Z</creation></dates><accession>S-EPMC11666716</accession><cross_references><pubmed>39715885</pubmed><doi>10.1038/s41698-024-00782-9</doi></cross_references></HashMap>