{"database":"biostudies-literature","file_versions":[],"scores":null,"additional":{"submitter":["Li J"],"funding":["Scientific Research Foundation of Third Institute of Oceanography","China Ocean Mineral Resources Research and Development Association","Natural Science Fund of Fujian Province of China","Scientific Research Foundation of Third Institute of Oceanography, MNR","High-Tech Research and Development Program of China","National Natural Science Foundation of China","Natural Science Foundation of Xiamen, China","National Key Research and Development Program of China"],"pagination":["ycae133"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/S-EPMC11697153"],"repository":["biostudies-literature"],"omics_type":["Unknown"],"volume":["4(1)"],"pubmed_abstract":["Transport of organic matter (OM) occurs widely in the form of animal and plant detritus in global oceans, playing a crucial role in global carbon cycling. While wood- and whale-falls have been extensively studied, the <i>in situ</i> process of OM remineralization by microorganisms remains poorly understood particularly in pelagic regions on a global scale. Here, enrichment experiments with animal tissue or plant detritus were carried out in three deep seas for 4-12 months using the deep-sea <i>in situ</i> incubators. We then performed community composition analyses as well as metagenomic and metatranscriptomic analyses. The results revealed strikingly similar microbial assemblages responsible for decomposing animal and plant detritus. Genes encoding peptidases and glucoside hydrolases were"],"journal":["ISME communications"],"pubmed_title":["Key bacteria decomposing animal and plant detritus in deep sea revealed via long-term &lt;i&gt;in situ&lt;/i&gt; incubation in different oceanic areas."],"pmcid":["PMC11697153"],"funding_grant_id":["42030412","2019021","DY135-B2-01","2023021","2024003","2023YFC2811402","2012AA092102","2021J02015","3502Z202472042"],"pubmed_authors":["Li J","Shao Z","Huang Z","Xiang S","Lai Q","Zhou D","Wei H","Gong L","Wang G","Wei G","Dong C"],"additional_accession":[]},"is_claimable":false,"name":"Key bacteria decomposing animal and plant detritus in deep sea revealed via long-term &lt;i&gt;in situ&lt;/i&gt; incubation in different oceanic areas.","description":"Transport of organic matter (OM) occurs widely in the form of animal and plant detritus in global oceans, playing a crucial role in global carbon cycling. While wood- and whale-falls have been extensively studied, the <i>in situ</i> process of OM remineralization by microorganisms remains poorly understood particularly in pelagic regions on a global scale. Here, enrichment experiments with animal tissue or plant detritus were carried out in three deep seas for 4-12 months using the deep-sea <i>in situ</i> incubators. We then performed community composition analyses as well as metagenomic and metatranscriptomic analyses. The results revealed strikingly similar microbial assemblages responsible for decomposing animal and plant detritus. Genes encoding peptidases and glucoside hydrolases were","dates":{"release":"2024-01-01T00:00:00Z","publication":"2024 Jan","modification":"2026-06-11T05:09:27.326Z","creation":"2026-06-11T03:07:55.744Z"},"accession":"S-EPMC11697153","cross_references":{"pubmed":["39759837"],"doi":["10.1093/ismeco/ycae133"]}}