{"database":"biostudies-literature","file_versions":[],"scores":null,"additional":{"omics_type":["Unknown"],"volume":["10(21)"],"submitter":["Edwards SV"],"pubmed_abstract":["We present a draft genome of the little bush moa (<i>Anomalopteryx didiformis</i>)-one of approximately nine species of extinct flightless birds from Aotearoa, New Zealand-using ancient DNA recovered from a fossil bone from the South Island. We recover a complete mitochondrial genome at 249.9× depth of coverage and almost 900 megabases of a male moa nuclear genome at ~4 to 5× coverage, with sequence contiguity sufficient to identify more than 85% of avian universal single-copy orthologs. We describe a diverse landscape of transposable elements and satellite repeats, estimate a long-term effective population size of ~240,000, identify a diverse suite of olfactory receptor genes and an opsin repertoire with sensitivity in the ultraviolet range, show that the wingless moa phenotype is likely "],"journal":["Science advances"],"pagination":["eadj6823"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/S-EPMC11809649"],"repository":["biostudies-literature"],"pubmed_title":["A nuclear genome assembly of an extinct flightless bird, the little bush moa."],"pmcid":["PMC11809649"],"pubmed_authors":["Katoh K","Baldwin MW","Baker AJ","Edwards SV","Driver R","Sackton TB","Cloutier A","Cockburn G","Grayson P"],"additional_accession":[]},"is_claimable":false,"name":"A nuclear genome assembly of an extinct flightless bird, the little bush moa.","description":"We present a draft genome of the little bush moa (<i>Anomalopteryx didiformis</i>)-one of approximately nine species of extinct flightless birds from Aotearoa, New Zealand-using ancient DNA recovered from a fossil bone from the South Island. We recover a complete mitochondrial genome at 249.9× depth of coverage and almost 900 megabases of a male moa nuclear genome at ~4 to 5× coverage, with sequence contiguity sufficient to identify more than 85% of avian universal single-copy orthologs. We describe a diverse landscape of transposable elements and satellite repeats, estimate a long-term effective population size of ~240,000, identify a diverse suite of olfactory receptor genes and an opsin repertoire with sensitivity in the ultraviolet range, show that the wingless moa phenotype is likely ","dates":{"release":"2024-01-01T00:00:00Z","publication":"2024 May","modification":"2026-06-01T17:59:45.329Z","creation":"2025-04-19T21:18:20.333Z"},"accession":"S-EPMC11809649","cross_references":{"pubmed":["38781323"],"doi":["10.1126/sciadv.adj6823"]}}