<HashMap><database>biostudies-literature</database><scores/><additional><submitter>Varghese AM</submitter><funding>U.S. Department of Health &amp; Human Services | NIH | National Cancer Institute (NCI)</funding><funding>U.S. Department of Health &amp;amp; Human Services | NIH | National Cancer Institute</funding><funding>NCI NIH HHS</funding><pagination>466-477</pagination><full_dataset_link>https://www.ebi.ac.uk/biostudies/studies/S-EPMC11835752</full_dataset_link><repository>biostudies-literature</repository><omics_type>Unknown</omics_type><volume>31(2)</volume><pubmed_abstract>Nearly all pancreatic adenocarcinomas (PDAC) are genomically characterized by KRAS exon 2 mutations. Most patients with PDAC present with advanced disease and are treated with cytotoxic therapy. Genomic biomarkers prognostic of disease outcomes have been challenging to identify. Herein leveraging a cohort of 2,336 patients spanning all disease stages, we characterize the genomic and clinical correlates of outcomes in PDAC. We show that a genomic subtype of KRAS wild-type tumors is associated with early disease onset, distinct somatic and germline features, and significantly better overall survival. Allelic imbalances at the KRAS locus are widespread. KRAS mutant allele dosage gains, observed in one in five (20%) KRAS-mutated diploid tumors, are correlated with advanced disease and demonstr</pubmed_abstract><journal>Nature medicine</journal><pubmed_title>Clinicogenomic landscape of pancreatic adenocarcinoma identifies KRAS mutant dosage as prognostic of overall survival.</pubmed_title><pmcid>PMC11835752</pmcid><funding_grant_id>P30 CA008748</funding_grant_id><funding_grant_id>P50 CA257881-01A1</funding_grant_id><funding_grant_id>CA257881-01A1</funding_grant_id><funding_grant_id>CA008748</funding_grant_id><funding_grant_id>P50 CA257881</funding_grant_id><funding_grant_id>R01 CA227534</funding_grant_id><pubmed_authors>Kelsen DP</pubmed_authors><pubmed_authors>Varghese AM</pubmed_authors><pubmed_authors>Schattner MA</pubmed_authors><pubmed_authors>Bandlamudi C</pubmed_authors><pubmed_authors>O'Reilly EM</pubmed_authors><pubmed_authors>Fong C</pubmed_authors><pubmed_authors>Perry MA</pubmed_authors><pubmed_authors>Chakravarty D</pubmed_authors><pubmed_authors>Park W</pubmed_authors><pubmed_authors>Wei AC</pubmed_authors><pubmed_authors>Erakky A</pubmed_authors><pubmed_authors>Schultz N</pubmed_authors><pubmed_authors>Chou JF</pubmed_authors><pubmed_authors>Yu KH</pubmed_authors><pubmed_authors>Nandakumar S</pubmed_authors><pubmed_authors>Berger MF</pubmed_authors><pubmed_authors>Mehine M</pubmed_authors><pubmed_authors>Stadler ZK</pubmed_authors><pubmed_authors>Mandelker D</pubmed_authors><pubmed_authors>Muldoon D</pubmed_authors><pubmed_authors>Basturk O</pubmed_authors><pubmed_authors>Balogun F</pubmed_authors><pubmed_authors>Brannon AR</pubmed_authors><pubmed_authors>Nguyen B</pubmed_authors><pubmed_authors>Zucker A</pubmed_authors><pubmed_authors>Capanu M</pubmed_authors><pubmed_authors>Vakiani E</pubmed_authors><pubmed_authors>Jarnagin WR</pubmed_authors><pubmed_authors>Iacobuzio-Donahue CA</pubmed_authors></additional><is_claimable>false</is_claimable><name>Clinicogenomic landscape of pancreatic adenocarcinoma identifies KRAS mutant dosage as prognostic of overall survival.</name><description>Nearly all pancreatic adenocarcinomas (PDAC) are genomically characterized by KRAS exon 2 mutations. Most patients with PDAC present with advanced disease and are treated with cytotoxic therapy. Genomic biomarkers prognostic of disease outcomes have been challenging to identify. Herein leveraging a cohort of 2,336 patients spanning all disease stages, we characterize the genomic and clinical correlates of outcomes in PDAC. We show that a genomic subtype of KRAS wild-type tumors is associated with early disease onset, distinct somatic and germline features, and significantly better overall survival. Allelic imbalances at the KRAS locus are widespread. KRAS mutant allele dosage gains, observed in one in five (20%) KRAS-mutated diploid tumors, are correlated with advanced disease and demonstr</description><dates><release>2025-01-01T00:00:00Z</release><publication>2025 Feb</publication><modification>2026-06-02T20:15:07.65Z</modification><creation>2025-04-07T07:54:41.51Z</creation></dates><accession>S-EPMC11835752</accession><cross_references><pubmed>39753968</pubmed><doi>10.1038/s41591-024-03362-3</doi></cross_references></HashMap>