{"database":"biostudies-literature","file_versions":[],"scores":null,"additional":{"omics_type":["Unknown"],"volume":["32(2)"],"submitter":["Zhang L"],"pubmed_abstract":["Phyllanthus emblica L. is an edible plant with medicinal properties native to the dry-hot valley of Yunnan, China. Here, we report a de novo chromosome-scale genome of P. emblica wild type 'Yingyu'. 'Yingyu' is an octopoid plant with a total of 104 chromosomes. In total, we assembled and clustered 480 Mb of the genome and constructed 26 pseudochromosomes (haplotypes) of P. emblica wild type 'Yingyu' that encompass 97.9% of the genome and demonstrate to have relatively high integrity. We annotated 31,111 genes found in the genome of P. emblica. We screened 5 different tissues for searching the tissue-specific expression candidate genes. Four unknown function candidate genes were expressed at high levels in the flowers while genes relating to the biosynthesis of gibberellins and cellulose we"],"journal":["DNA research : an international journal for rapid publication of reports on genes and genomes"],"pagination":["dsaf006"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/S-EPMC12010035"],"repository":["biostudies-literature"],"pubmed_title":["Chromosome-scale genome assembly of Phyllanthus emblica L. 'Yingyu'."],"pmcid":["PMC12010035"],"pubmed_authors":["Lei X","Zhao Q","Zhang L","Ma K","Liao C","Qu W","Qian K","Jin J","Yuan J","Pu T"],"additional_accession":[]},"is_claimable":false,"name":"Chromosome-scale genome assembly of Phyllanthus emblica L. 'Yingyu'.","description":"Phyllanthus emblica L. is an edible plant with medicinal properties native to the dry-hot valley of Yunnan, China. Here, we report a de novo chromosome-scale genome of P. emblica wild type 'Yingyu'. 'Yingyu' is an octopoid plant with a total of 104 chromosomes. In total, we assembled and clustered 480 Mb of the genome and constructed 26 pseudochromosomes (haplotypes) of P. emblica wild type 'Yingyu' that encompass 97.9% of the genome and demonstrate to have relatively high integrity. We annotated 31,111 genes found in the genome of P. emblica. We screened 5 different tissues for searching the tissue-specific expression candidate genes. Four unknown function candidate genes were expressed at high levels in the flowers while genes relating to the biosynthesis of gibberellins and cellulose we","dates":{"release":"2025-01-01T00:00:00Z","publication":"2025 Mar","modification":"2025-07-07T03:10:02.994Z","creation":"2025-07-07T03:10:02.994Z"},"accession":"S-EPMC12010035","cross_references":{"pubmed":["40070358"],"doi":["10.1093/dnares/dsaf006"]}}