{"database":"biostudies-literature","file_versions":[],"scores":null,"additional":{"omics_type":["Unknown"],"submitter":["Goncalves M"],"funding":["NIBIB NIH HHS","NIMH NIH HHS"],"pubmed_abstract":["The adoption of a standardized preprocessing workflow is vital for fostering community, sharing, and reproducibility. fMRIPrep has been a critical advancement towards this end, however, it is limited in its capacity to be applied to data across the lifespan, starting from infancy. Here, we introduce fMRIPrep Lifespan, an extension of fMRIPrep that extends the standardized processing from childhood to senescence to include neonatal, infant, and toddler structural and functional MRI data preprocessing. This effort involves a NiPreps integration of 1) a workflow akin to fMRIPrep optimized for MRI data in the first years of life (previously NiBabies) and 2) upstream enhancements to the entire NiPreps suite, including multi-echo data processing, modularization of workflow components, and conver"],"journal":["bioRxiv : the preprint server for biology"],"pagination":["2025.05.14.654069"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/S-EPMC12132292"],"repository":["biostudies-literature"],"pubmed_title":["fMRIPrep Lifespan: Extending A Robust Pipeline for Functional MRI Preprocessing to Developmental Neuroimaging."],"pmcid":["PMC12132292"],"funding_grant_id":["R01 MH104324","R01 EB022573","RF1 MH121867","R01 MH113550","R37 MH125829","U01 MH110274"],"pubmed_authors":["Nelson SM","Hermosillo RJM","Yacoub E","Lundquist JT","Smyser CD","Esteban O","McCollum R","Madison TJ","Pham HHN","Sanchez J","Salo T","Hadera L","Lee E","Conan G","Styner MA","Koirala S","Wengler K","Moore LA","Vizioli L","Patel GH","Fayzullobekova B","Goncalves M","Feczko E","Alexopoulos D","Stoyell SM","Moser J","Houghton A","Fair DA","Elison JT","Poldrack RA","Satterthwaite TD","Markiewicz CJ","Weldon KB"],"additional_accession":[]},"is_claimable":false,"name":"fMRIPrep Lifespan: Extending A Robust Pipeline for Functional MRI Preprocessing to Developmental Neuroimaging.","description":"The adoption of a standardized preprocessing workflow is vital for fostering community, sharing, and reproducibility. fMRIPrep has been a critical advancement towards this end, however, it is limited in its capacity to be applied to data across the lifespan, starting from infancy. Here, we introduce fMRIPrep Lifespan, an extension of fMRIPrep that extends the standardized processing from childhood to senescence to include neonatal, infant, and toddler structural and functional MRI data preprocessing. This effort involves a NiPreps integration of 1) a workflow akin to fMRIPrep optimized for MRI data in the first years of life (previously NiBabies) and 2) upstream enhancements to the entire NiPreps suite, including multi-echo data processing, modularization of workflow components, and conver","dates":{"release":"2025-01-01T00:00:00Z","publication":"2025 May","modification":"2026-04-08T01:38:41.837Z","creation":"2026-04-07T20:24:57.919Z"},"accession":"S-EPMC12132292","cross_references":{"pubmed":["40462975"],"doi":["10.1101/2025.05.14.654069"]}}