{"database":"biostudies-literature","file_versions":[],"scores":null,"additional":{"submitter":["Mutemi KN"],"funding":["EMBO Long Term Fellowship","Agence Nationale de la Recherche","European Research Council","Deutsche Forschungsgemeinschaft","Marie Skłodowska-Curie ITN","NIGMS NIH HHS","NIH HHS","Labex \"Who Am I\""],"pagination":["665"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/S-EPMC12257675"],"repository":["biostudies-literature"],"omics_type":["Unknown"],"volume":["26(1)"],"pubmed_abstract":["The marine annelid Platynereis dumerilii is a model organism used in many research areas including evolution and development, neurobiology, ecology and regeneration. Here we present the genomes of P. dumerilii (laboratory culture reference and a single individual assembly) and of the closely related P. massiliensis and P. megalops (single individual assembly) to facilitate comparative genomic approaches and help explore Platynereis biology. We used long-read sequencing technology and chromosomal-conformation capture along with extensive transcriptomic resources to obtain and annotate a draft genome assembly of ~ 1.47 Gbp for P. dumerilii, of which more than half represent repeat elements. We predict around 29,000 protein-coding genes, with relatively large intron sizes, over 38,000 non-cod"],"journal":["BMC genomics"],"pubmed_title":["A genome resource for the marine annelid Platynereis spp."],"pmcid":["PMC12257675"],"funding_grant_id":["\"EvoCELL\" #766053","DFG GZ TO 563/7-1","HE 7224/8-1","R35 GM138008","NeuralCellTypeEvo #788921","788921","1R35GM138008-01","ALTF 74-2018","ANR- 11-LABX-0071","ANR-19-CE27-0027-01"],"pubmed_authors":["Vellutini BC","Hercog R","Peterson KJ","Simakov O","Ordonez-Rueda D","Fromm B","Tomancak P","Azevedo N","Handberg-Thorsager M","Mutemi KN","Gazave E","Ozpolat BD","Larsson T","Helm C","Arendt D","Hui J","Null RW","Vervoort M","Lopez MO","Tan W","Provaznik J","Pan L","Santangeli L","Savage E","Benes V","Winkler S"],"additional_accession":[]},"is_claimable":false,"name":"A genome resource for the marine annelid Platynereis spp.","description":"The marine annelid Platynereis dumerilii is a model organism used in many research areas including evolution and development, neurobiology, ecology and regeneration. Here we present the genomes of P. dumerilii (laboratory culture reference and a single individual assembly) and of the closely related P. massiliensis and P. megalops (single individual assembly) to facilitate comparative genomic approaches and help explore Platynereis biology. We used long-read sequencing technology and chromosomal-conformation capture along with extensive transcriptomic resources to obtain and annotate a draft genome assembly of ~ 1.47 Gbp for P. dumerilii, of which more than half represent repeat elements. We predict around 29,000 protein-coding genes, with relatively large intron sizes, over 38,000 non-cod","dates":{"release":"2025-01-01T00:00:00Z","publication":"2025 Jul","modification":"2026-03-16T01:09:51.952Z","creation":"2025-08-21T09:51:16.23Z"},"accession":"S-EPMC12257675","cross_references":{"pubmed":["40660120"],"doi":["10.1186/s12864-025-11727-2"]}}