{"database":"biostudies-literature","file_versions":[],"scores":null,"additional":{"omics_type":["Unknown"],"volume":["16"],"submitter":["Shi H"],"pubmed_abstract":["<h4>Background</h4>Although precision-targeted therapies and tyrosine kinase inhibitors (TKIs) have significantly improved outcomes in non-small-cell lung cancer (NSCLC), patients with EGFR-mutant NSCLC with concurrent TP53 mutations often develop drug resistance and experience poor clinical outcomes. This study aims to investigate the molecular mechanisms underlying this aggressive subtype using single-cell RNA sequencing.<h4>Methods</h4>Formalin-fixed paraffin-embedded (FFPE) tumor samples were obtained from 40 hospitalized NSCLC patients. Somatic mutation profiles were determined using a targeted 23-gene next-generation sequencing (NGS) panel. Four samples harboring concurrent EGFR and TP53 mutations were selected for single-cell transcriptomic profiling using the 10x Genomics platform.<h4>Results</h4>Two dominant malignant epithelial cell populations were identified: C1_EGFR<sup>+</sup>, associated with proliferation and invasion, and C2_STAT1<sup>+</sup>, linked to immunosuppression and drug resistance. These tumor subtypes cooperatively drive CD8<sup>+</sup> T cell exhaustion through the MDK-(ITGA4+ITGB1), MIF-(CD74+CXCR4), and TGF-β signaling pathways. In addition, antigen-presenting cancer-associated fibroblasts (apCAFs) recruit regulatory T cells via the CCL5-CCR4 axis, collectively establishing an immune-excluded tumor microenvironment. Mechanistically, a STAT1/ETS1-centered transcriptional program regulates the expression of key immunosuppressive (e.g., MDK, MIF, TGFB1) and resistance-associated genes (e.g., ERBB2, JAK2).<h4>Conclusion</h4>These findings reveal a coordinated transcriptional network that promotes immune evasion and therapeutic resistance in EGFR/TP53 co-mutated NSCLC. Targeting the STAT1/ETS1 axis, in combination with EGFR-TKIs or immune checkpoint inhibitors, may provide a novel strategy to overcome resistance and improve patient outcomes. Further validation in larger patient cohorts and functional studies is warranted to confirm these observations and support clinical translation."],"journal":["Frontiers in immunology"],"pagination":["1652213"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/S-EPMC12425899"],"repository":["biostudies-literature"],"pubmed_title":["Dissecting the immune evasion and therapeutic resistance mechanisms in EGFR/TP53 co-mutated non-small cell lung cancer: implications for targeted and immunotherapy strategies."],"pmcid":["PMC12425899"],"pubmed_authors":["Xu K","Xie W","He D","Song M","Gao K","Huo X","Chen Y","Tian N","Shi H","Kong X","Cheng Z"],"additional_accession":[]},"is_claimable":false,"name":"Dissecting the immune evasion and therapeutic resistance mechanisms in EGFR/TP53 co-mutated non-small cell lung cancer: implications for targeted and immunotherapy strategies.","description":"<h4>Background</h4>Although precision-targeted therapies and tyrosine kinase inhibitors (TKIs) have significantly improved outcomes in non-small-cell lung cancer (NSCLC), patients with EGFR-mutant NSCLC with concurrent TP53 mutations often develop drug resistance and experience poor clinical outcomes. This study aims to investigate the molecular mechanisms underlying this aggressive subtype using single-cell RNA sequencing.<h4>Methods</h4>Formalin-fixed paraffin-embedded (FFPE) tumor samples were obtained from 40 hospitalized NSCLC patients. Somatic mutation profiles were determined using a targeted 23-gene next-generation sequencing (NGS) panel. Four samples harboring concurrent EGFR and TP53 mutations were selected for single-cell transcriptomic profiling using the 10x Genomics platform.<h4>Results</h4>Two dominant malignant epithelial cell populations were identified: C1_EGFR<sup>+</sup>, associated with proliferation and invasion, and C2_STAT1<sup>+</sup>, linked to immunosuppression and drug resistance. These tumor subtypes cooperatively drive CD8<sup>+</sup> T cell exhaustion through the MDK-(ITGA4+ITGB1), MIF-(CD74+CXCR4), and TGF-β signaling pathways. In addition, antigen-presenting cancer-associated fibroblasts (apCAFs) recruit regulatory T cells via the CCL5-CCR4 axis, collectively establishing an immune-excluded tumor microenvironment. Mechanistically, a STAT1/ETS1-centered transcriptional program regulates the expression of key immunosuppressive (e.g., MDK, MIF, TGFB1) and resistance-associated genes (e.g., ERBB2, JAK2).<h4>Conclusion</h4>These findings reveal a coordinated transcriptional network that promotes immune evasion and therapeutic resistance in EGFR/TP53 co-mutated NSCLC. Targeting the STAT1/ETS1 axis, in combination with EGFR-TKIs or immune checkpoint inhibitors, may provide a novel strategy to overcome resistance and improve patient outcomes. Further validation in larger patient cohorts and functional studies is warranted to confirm these observations and support clinical translation.","dates":{"release":"2025-01-01T00:00:00Z","publication":"2025","modification":"2026-06-03T02:51:25.196Z","creation":"2026-04-23T03:11:52.851Z"},"accession":"S-EPMC12425899","cross_references":{"pubmed":["40948762"],"doi":["10.3389/fimmu.2025.1652213"]}}