<HashMap><database>biostudies-literature</database><scores/><additional><submitter>Rowntree LC</submitter><funding>NIAID NIH HHS</funding><funding>Federal Government | DHAC | National Health and Medical Research Council (NHMRC)</funding><pagination>e2503145122</pagination><full_dataset_link>https://www.ebi.ac.uk/biostudies/studies/S-EPMC12435269</full_dataset_link><repository>biostudies-literature</repository><omics_type>Unknown</omics_type><volume>122(36)</volume><pubmed_abstract>Understanding host factors driving asymptomatic versus severe disease outcomes is of key importance if we are to control emerging and re-emerging viral infections. HLA-B*15:01 has been associated with asymptomatic SARS-CoV-2 infection in nonhospitalized individuals of European ancestry, with protective immunity attributed to preexisting cross-reactive CD8&lt;sup>+&lt;/sup> T-cells directed against HLA-B*15:01-restricted Spike-derived S&lt;sub>919-927&lt;/sub> peptide (B15/S&lt;sub>919&lt;/sub>&lt;sup>+&lt;/sup>CD8&lt;sup>+&lt;/sup> T-cells). However, fundamental questions remained on the abundance and clonotypic nature of CD8&lt;sup>+&lt;/sup> T-cell responses in HLA-B*15:01-positive patients who succumbed to life-threatening COVID-19. Here, we analyzed B15/S&lt;sub>919&lt;/sub>&lt;sup>+&lt;/sup>CD8&lt;sup>+&lt;/sup> T-cell responses in COVID</pubmed_abstract><journal>Proceedings of the National Academy of Sciences of the United States of America</journal><pubmed_title>HLA-B*15:01-positive severe COVID-19 patients lack CD8&amp;lt;sup&amp;gt;+&amp;lt;/sup&amp;gt; T cell pools with highly expanded public clonotypes.</pubmed_title><pmcid>PMC12435269</pmcid><funding_grant_id>U01 AI144616</funding_grant_id><funding_grant_id>1173871</funding_grant_id><pubmed_authors>Doherty PC</pubmed_authors><pubmed_authors>Rowntree LC</pubmed_authors><pubmed_authors>Kaewpreedee P</pubmed_authors><pubmed_authors>Peiris M</pubmed_authors><pubmed_authors>Sonehara K</pubmed_authors><pubmed_authors>Valkenburg SA</pubmed_authors><pubmed_authors>Habel JR</pubmed_authors><pubmed_authors>McKay MR</pubmed_authors><pubmed_authors>Kotsimbos TC</pubmed_authors><pubmed_authors>Gao GF</pubmed_authors><pubmed_authors>Juno JA</pubmed_authors><pubmed_authors>Kwok JSY</pubmed_authors><pubmed_authors>Cohen CA</pubmed_authors><pubmed_authors>Kent SJ</pubmed_authors><pubmed_authors>PHOSP-COVID Collaborative Group</pubmed_authors><pubmed_authors>Allen LF</pubmed_authors><pubmed_authors>McQuilten HA</pubmed_authors><pubmed_authors>Leung KSM</pubmed_authors><pubmed_authors>Thwaites RS</pubmed_authors><pubmed_authors>Xu J</pubmed_authors><pubmed_authors>Turtle L</pubmed_authors><pubmed_authors>Bond KA</pubmed_authors><pubmed_authors>Tosif S</pubmed_authors><pubmed_authors>Quadeer AA</pubmed_authors><pubmed_authors>Davies J</pubmed_authors><pubmed_authors>Lappas M</pubmed_authors><pubmed_authors>Kedzierska K</pubmed_authors><pubmed_authors>Thomas PG</pubmed_authors><pubmed_authors>Trubiano JA</pubmed_authors><pubmed_authors>Kaity Allen E</pubmed_authors><pubmed_authors>Lewin SR</pubmed_authors><pubmed_authors>Smibert OC</pubmed_authors><pubmed_authors>Gordon CL</pubmed_authors><pubmed_authors>Efstathiou C</pubmed_authors><pubmed_authors>Rossjohn J</pubmed_authors><pubmed_authors>Petersen J</pubmed_authors><pubmed_authors>Holmes NE</pubmed_authors><pubmed_authors>Chaurasia P</pubmed_authors><pubmed_authors>Namkoong H</pubmed_authors><pubmed_authors>Poon LLM</pubmed_authors><pubmed_authors>Wu JT</pubmed_authors><pubmed_authors>Ishii KJ</pubmed_authors><pubmed_authors>Liu WJ</pubmed_authors><pubmed_authors>Chan KKP</pubmed_authors><pubmed_authors>Pannaraj PS</pubmed_authors><pubmed_authors>Littler DR</pubmed_authors><pubmed_authors>Tian J</pubmed_authors><pubmed_authors>Cheng AC</pubmed_authors><pubmed_authors>Crawford NW</pubmed_authors><pubmed_authors>Thevarajan I</pubmed_authors><pubmed_authors>Hui DSC</pubmed_authors><pubmed_authors>Brightling CE</pubmed_authors><pubmed_authors>Zhang W</pubmed_authors><pubmed_authors>Lee CK</pubmed_authors><pubmed_authors>Okada Y</pubmed_authors><pubmed_authors>Lee KWK</pubmed_authors><pubmed_authors>Cheng SMS</pubmed_authors><pubmed_authors>Nguyen THO</pubmed_authors><pubmed_authors>Hagen RR</pubmed_authors><pubmed_authors>Williamson DA</pubmed_authors></additional><is_claimable>false</is_claimable><name>HLA-B*15:01-positive severe COVID-19 patients lack CD8&amp;lt;sup&amp;gt;+&amp;lt;/sup&amp;gt; T cell pools with highly expanded public clonotypes.</name><description>Understanding host factors driving asymptomatic versus severe disease outcomes is of key importance if we are to control emerging and re-emerging viral infections. HLA-B*15:01 has been associated with asymptomatic SARS-CoV-2 infection in nonhospitalized individuals of European ancestry, with protective immunity attributed to preexisting cross-reactive CD8&lt;sup>+&lt;/sup> T-cells directed against HLA-B*15:01-restricted Spike-derived S&lt;sub>919-927&lt;/sub> peptide (B15/S&lt;sub>919&lt;/sub>&lt;sup>+&lt;/sup>CD8&lt;sup>+&lt;/sup> T-cells). However, fundamental questions remained on the abundance and clonotypic nature of CD8&lt;sup>+&lt;/sup> T-cell responses in HLA-B*15:01-positive patients who succumbed to life-threatening COVID-19. Here, we analyzed B15/S&lt;sub>919&lt;/sub>&lt;sup>+&lt;/sup>CD8&lt;sup>+&lt;/sup> T-cell responses in COVID</description><dates><release>2025-01-01T00:00:00Z</release><publication>2025 Sep</publication><modification>2026-06-01T15:50:01.829Z</modification><creation>2026-04-08T13:50:39.264Z</creation></dates><accession>S-EPMC12435269</accession><cross_references><pubmed>40892914</pubmed><doi>10.1073/pnas.2503145122</doi></cross_references></HashMap>