{"database":"biostudies-literature","file_versions":[],"scores":null,"additional":{"omics_type":["Unknown"],"volume":["10(10)"],"submitter":["Meng K"],"pubmed_abstract":["Despite being an economically significant fruit, the availability of <i>Mangifera</i> chloroplast genome sequences remains limited. In this study, we assembled, annotated, and characterized the complete chloroplast genomes of <i>Mangifera indica</i> 'Guiqi' and <i>M. quadrifida</i>. The chloroplast genomes of <i>M. indica</i> 'Guiqi' (157,780 bp) and <i>M. quadrifida</i> (158,979 bp) both exhibit a quadripartite structure, contain 87 protein-coding, 37 tRNA, and 8 rRNA genes, and have GC contents of 37.9% and 37.8%, respectively. Phylogenetic analysis confirmed the maternal origin of <i>M. indica</i> 'Guiqi' and revealed the closest affinity between <i>M. quadrifida</i> and <i>M. similis</i>, indicating widespread hybridization and introgressions."],"journal":["Mitochondrial DNA. Part B, Resources"],"pagination":["996-1001"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/S-EPMC12486444"],"repository":["biostudies-literature"],"pubmed_title":["Chloroplast genome characteristics and phylogenetic analysis of &lt;i&gt;Mangifera indica&lt;/i&gt; L. 'Guiqi' and &lt;i&gt;M. quadrifida&lt;/i&gt; Jack (anacardiaceae)."],"pmcid":["PMC12486444"],"pubmed_authors":["Lu L","Lee SY","Huang G","Qu J","Zou P","Qin Y","Meng K"],"additional_accession":[]},"is_claimable":false,"name":"Chloroplast genome characteristics and phylogenetic analysis of &lt;i&gt;Mangifera indica&lt;/i&gt; L. 'Guiqi' and &lt;i&gt;M. quadrifida&lt;/i&gt; Jack (anacardiaceae).","description":"Despite being an economically significant fruit, the availability of <i>Mangifera</i> chloroplast genome sequences remains limited. In this study, we assembled, annotated, and characterized the complete chloroplast genomes of <i>Mangifera indica</i> 'Guiqi' and <i>M. quadrifida</i>. The chloroplast genomes of <i>M. indica</i> 'Guiqi' (157,780 bp) and <i>M. quadrifida</i> (158,979 bp) both exhibit a quadripartite structure, contain 87 protein-coding, 37 tRNA, and 8 rRNA genes, and have GC contents of 37.9% and 37.8%, respectively. Phylogenetic analysis confirmed the maternal origin of <i>M. indica</i> 'Guiqi' and revealed the closest affinity between <i>M. quadrifida</i> and <i>M. similis</i>, indicating widespread hybridization and introgressions.","dates":{"release":"2025-01-01T00:00:00Z","publication":"2025","modification":"2026-06-04T02:27:11.622Z","creation":"2026-05-04T03:13:19.329Z"},"accession":"S-EPMC12486444","cross_references":{"pubmed":["41041298"],"doi":["10.1080/23802359.2025.2550612"]}}