{"database":"biostudies-literature","file_versions":[],"scores":null,"additional":{"omics_type":["Unknown"],"volume":["14(11)"],"submitter":["Yingkajorn M"],"pubmed_abstract":["<b>Background/Objectives</b>: <i>Bacteroides</i> species are key members of the human gut microbiota but can act as opportunistic pathogens. This study investigated the genomic features of clinical <i>Bacteroides</i> isolates from southern Thailand. <b>Methods</b>: Sixteen isolates were collected from body fluids, tissues, and pus at Songklanagarind Hospital (2022-2024). Whole-genome sequencing was performed on the BGI platform, followed by genome assembly, annotation, average nucleotide identity (ANI), pairwise single-nucleotide polymorphism (SNP) analysis, antimicrobial resistance (AMR) gene profiling, plasmid prediction, virulence screening, and phylogenetic analysis. <b>Results</b>: ANI and SNP analysis revealed two clusters: one comprising <i>B. ovatus</i>, <i>B. intestinigallinarum</"],"journal":["Antibiotics (Basel, Switzerland)"],"pagination":["1143"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/S-EPMC12649151"],"repository":["biostudies-literature"],"pubmed_title":["Phylogenomics and Antimicrobial Resistance of Clinical &lt;i&gt;Bacteroides&lt;/i&gt; Isolates from a Tertiary Hospital in Southern Thailand."],"pmcid":["PMC12649151"],"pubmed_authors":["Pomwised R","Wonglapsuwan M","Duangsi-Ngoen W","Klaysubun C","Singkhamanan K","Yaikhan T","Yingkajorn M","Chusri S","Dechathai T","Surachat K"],"additional_accession":[]},"is_claimable":false,"name":"Phylogenomics and Antimicrobial Resistance of Clinical &lt;i&gt;Bacteroides&lt;/i&gt; Isolates from a Tertiary Hospital in Southern Thailand.","description":"<b>Background/Objectives</b>: <i>Bacteroides</i> species are key members of the human gut microbiota but can act as opportunistic pathogens. This study investigated the genomic features of clinical <i>Bacteroides</i> isolates from southern Thailand. <b>Methods</b>: Sixteen isolates were collected from body fluids, tissues, and pus at Songklanagarind Hospital (2022-2024). Whole-genome sequencing was performed on the BGI platform, followed by genome assembly, annotation, average nucleotide identity (ANI), pairwise single-nucleotide polymorphism (SNP) analysis, antimicrobial resistance (AMR) gene profiling, plasmid prediction, virulence screening, and phylogenetic analysis. <b>Results</b>: ANI and SNP analysis revealed two clusters: one comprising <i>B. ovatus</i>, <i>B. intestinigallinarum</","dates":{"release":"2025-01-01T00:00:00Z","publication":"2025 Nov","modification":"2026-05-19T03:14:57.22Z","creation":"2026-05-19T03:11:11.547Z"},"accession":"S-EPMC12649151","cross_references":{"pubmed":["41301638"],"doi":["10.3390/antibiotics14111143"]}}