{"database":"biostudies-literature","file_versions":[],"scores":null,"additional":{"omics_type":["Unknown"],"volume":["16"],"submitter":["Nataraj V"],"pubmed_abstract":["Charcoal rot is a soil- and seed-borne disease caused by a necrotrophic fungal pathogen-<i>Macrophomina phaseolina</i>. To understand the genetic architecture of resistance against it, a genome-wide association study (GWAS) was conducted based on a glasshouse experiment and a 3-year field experiment using 214 diverse soybean accessions. In a glasshouse experiment at the seedling stage, eight single-nucleotide polymorphisms (SNPs) were identified: one SNP each on chromosome (chr) 8 (<i>S8_16817767</i>), chr 10 (<i>S10_52066337</i>), chr 14 (<i>S14_50857981</i>), chr 15 (<i>S15_32620059</i>), chr 17 (<i>S17_1689021</i>), and chr 18 (<i>S18_9413708</i>), while two SNPs (<i>S16_34569104</i> and <i>S16_37878937</i>) were located on chr 16. In the case of the field experiment at the reproductive"],"journal":["Frontiers in plant science"],"pagination":["1649397"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/S-EPMC12748003"],"repository":["biostudies-literature"],"pubmed_title":["Unveiling key genetic determinants of charcoal rot resistance in soybean via genome-wide association studies."],"pmcid":["PMC12748003"],"pubmed_authors":["Raghuvanshi R","Gupta S","Maranna S","Singh KH","Rajput LS","Nataraj V","Pathak K","Kumawat G","Mandloi S","Amrate PK","Mohare S","Shrivastava MK","Chitikineni A","Rajesh V","Ratnaparkhe MB","Naik K B","Agrawal N","Varshney RK"],"additional_accession":[]},"is_claimable":false,"name":"Unveiling key genetic determinants of charcoal rot resistance in soybean via genome-wide association studies.","description":"Charcoal rot is a soil- and seed-borne disease caused by a necrotrophic fungal pathogen-<i>Macrophomina phaseolina</i>. To understand the genetic architecture of resistance against it, a genome-wide association study (GWAS) was conducted based on a glasshouse experiment and a 3-year field experiment using 214 diverse soybean accessions. In a glasshouse experiment at the seedling stage, eight single-nucleotide polymorphisms (SNPs) were identified: one SNP each on chromosome (chr) 8 (<i>S8_16817767</i>), chr 10 (<i>S10_52066337</i>), chr 14 (<i>S14_50857981</i>), chr 15 (<i>S15_32620059</i>), chr 17 (<i>S17_1689021</i>), and chr 18 (<i>S18_9413708</i>), while two SNPs (<i>S16_34569104</i> and <i>S16_37878937</i>) were located on chr 16. In the case of the field experiment at the reproductive","dates":{"release":"2025-01-01T00:00:00Z","publication":"2025","modification":"2026-05-28T03:24:27.646Z","creation":"2026-05-28T03:12:07.752Z"},"accession":"S-EPMC12748003","cross_references":{"pubmed":["41477268"],"doi":["10.3389/fpls.2025.1649397"]}}