{"database":"biostudies-literature","file_versions":[],"scores":null,"additional":{"submitter":["Laufer Halpin A"],"funding":["Centers for Disease Control and Prevention","National Institute for Health Research (NIHR)","Intramural CDC HHS"],"pagination":["e235-e244"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/S-EPMC12771277"],"repository":["biostudies-literature"],"omics_type":["Unknown"],"volume":["25(4)"],"pubmed_abstract":["Antimicrobial resistance continues to be a growing threat globally, specifically in health-care settings in which antimicrobial-resistant pathogens cause a substantial proportion of health-care-associated infections (HAIs). Next-generation sequencing (NGS) and the analysis of the data produced therein (ie, bioinformatics) represent an opportunity to enhance our capacity to address these threats. The 3rd Geneva Infection Prevention and Control Think Tank brought together experts to identify gaps, propose solutions, and set priorities for the use of NGS for HAIs and antimicrobial-resistant pathogens. The major deliverable recommendation from this meeting was a proposed framework for implementing the sequencing of HAI pathogens, specifically those harbouring antimicrobial-resistance mechanism"],"journal":["The Lancet. Infectious diseases"],"pubmed_title":["A framework towards implementation of sequencing for antimicrobial-resistant and other health-care-associated pathogens."],"pmcid":["PMC12771277"],"funding_grant_id":["CC999999","NIHR133307"],"pubmed_authors":["Brown A","Okeke IN","Peter S","Call PDR","Corso A","Breuer PJ","Zingg W","Srikantiah P","Perencevich EN","Plachouras D","Feasey PNA","Marimuthu K","Shenoy ES","Elkins CA","Rhee C","Smith RM","Snitkin ES","Hennig TJ","Samore PMH","Stanton R","McDonald LC","Laufer Halpin A","Grundmann PH","Cardo D","Harbarth S","Eyre PDW","MacCannell D","Mathers AJ","Abbas M","Andrey DO","Govender PNP","Peacock SJ","Srinivasan A","Bell M","Hayden PMK","Schrenzel PJ","McBride S","Zanella MC","3rd Geneva Infection Prevention and Control Think Tank","Walsh TR","Brown L","Kim PHB","Cheng VC","Pittet D","Park B","Malhotra-Kumar PS","Jernigan J"],"additional_accession":[]},"is_claimable":false,"name":"A framework towards implementation of sequencing for antimicrobial-resistant and other health-care-associated pathogens.","description":"Antimicrobial resistance continues to be a growing threat globally, specifically in health-care settings in which antimicrobial-resistant pathogens cause a substantial proportion of health-care-associated infections (HAIs). Next-generation sequencing (NGS) and the analysis of the data produced therein (ie, bioinformatics) represent an opportunity to enhance our capacity to address these threats. The 3rd Geneva Infection Prevention and Control Think Tank brought together experts to identify gaps, propose solutions, and set priorities for the use of NGS for HAIs and antimicrobial-resistant pathogens. The major deliverable recommendation from this meeting was a proposed framework for implementing the sequencing of HAI pathogens, specifically those harbouring antimicrobial-resistance mechanism","dates":{"release":"2025-01-01T00:00:00Z","publication":"2025 Apr","modification":"2026-06-09T05:22:49.713Z","creation":"2026-06-09T03:07:32.48Z"},"accession":"S-EPMC12771277","cross_references":{"pubmed":["39832513"],"doi":["10.1016/S1473-3099(24)00729-1","10.1016/s1473-3099(24)00729-1"]}}