{"database":"biostudies-literature","file_versions":[],"scores":null,"additional":{"submitter":["Cheng Y"],"funding":["Shandong Province Science and Technology-based Small and Medium-sized Enterprises Innovation Capacity Enhancement Project"],"pagination":["4"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/S-EPMC12804471"],"repository":["biostudies-literature"],"omics_type":["Unknown"],"volume":["16(1)"],"pubmed_abstract":["The secondary metabolite A40926, a precursor to the glycopeptide antibiotic dalbavancin, is synthesized by the rare actinomycete Nonomuraea gerenzanensis (N. gerenzanensis) within the pharmaceutical industry. The biosynthesis of A40926 is accompanied by the production of an orange pigment, which poses significant challenges and incurs high costs in the purification process of A40926. To identify this orange pigment, a comprehensive analysis was conducted, including the examination of the biosynthetic gene cluster, potential biosynthetic pathways, purification processes, and structural identification. Additionally, the ispF gene, which encodes the enzyme 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase and is implicated in the biosynthesis of orange pigment, was deleted using the CRISP"],"journal":["AMB Express"],"pubmed_title":["Identification of the orange pigment in Nonomuraea gerenzanensis and development of a pigment-free mutant."],"pmcid":["PMC12804471"],"funding_grant_id":["2024TSGC0896"],"pubmed_authors":["Shi S","Dong H","Gao W","Cheng Y","Han F"],"additional_accession":[]},"is_claimable":false,"name":"Identification of the orange pigment in Nonomuraea gerenzanensis and development of a pigment-free mutant.","description":"The secondary metabolite A40926, a precursor to the glycopeptide antibiotic dalbavancin, is synthesized by the rare actinomycete Nonomuraea gerenzanensis (N. gerenzanensis) within the pharmaceutical industry. The biosynthesis of A40926 is accompanied by the production of an orange pigment, which poses significant challenges and incurs high costs in the purification process of A40926. To identify this orange pigment, a comprehensive analysis was conducted, including the examination of the biosynthetic gene cluster, potential biosynthetic pathways, purification processes, and structural identification. Additionally, the ispF gene, which encodes the enzyme 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase and is implicated in the biosynthesis of orange pigment, was deleted using the CRISP","dates":{"release":"2025-01-01T00:00:00Z","publication":"2025 Dec","modification":"2026-06-11T05:28:31.4Z","creation":"2026-06-11T03:08:17.418Z"},"accession":"S-EPMC12804471","cross_references":{"pubmed":["41348151"],"doi":["10.1186/s13568-025-01993-4"]}}