<HashMap><database>biostudies-literature</database><scores><citationCount>0</citationCount><reanalysisCount>0</reanalysisCount><viewCount>49</viewCount><searchCount>0</searchCount></scores><additional><submitter>Laje G</submitter><funding>Intramural NIH HHS</funding><funding>NHLBI NIH HHS</funding><funding>NIMH NIH HHS</funding><funding>PHS HHS</funding><pagination>666-74</pagination><full_dataset_link>https://www.ebi.ac.uk/biostudies/studies/S-EPMC2819190</full_dataset_link><repository>biostudies-literature</repository><omics_type>Unknown</omics_type><volume>19(9)</volume><pubmed_abstract>&lt;h4>Objectives&lt;/h4>Suicidal ideation is an uncommon but worrisome symptom than can emerge during antidepressant treatment. We have described earlier the association between treatment-emergent suicidal ideation (TESI) and markers in genes encoding glutamate receptor subunits GRIK2 and GRIA3. The present genome-wide association study was conducted to identify additional genetic markers associated with TESI that may help identify individuals at high risk who may benefit from closer monitoring, alternative treatments, and/or specialty care.&lt;h4>Methods&lt;/h4>A clinically representative cohort of outpatients with nonpsychotic major depressive disorder enrolled in the Sequenced Treatment Alternatives to Relieve Depression (STAR*D) trial were treated with citalopram under a standard protocol for up to 14 weeks. DNA samples from 90 White participants who developed TESI and a sex-matched and race-matched equal number of treated participants who denied any suicidal ideas were genotyped with 109 365 single nucleotide polymorphisms on the Illumina's Human-1 BeadChip.&lt;h4>Results&lt;/h4>One marker was found to be associated with TESI in this sample at the experiment-wide adjusted P less than 0.05 level (marker rs11628713, allelic P = 6.2x10, odds ratio = 4.7, permutation P = 0.01). A second marker was associated at the experiment-wide adjusted P = 0.06 level (rs10903034, allelic P = 3.02x10, odds ratio = 2.7, permutation P = 0.06). These markers reside within the genes PAPLN and IL28RA, respectively. PAPLN encodes papilin, a protoglycan-like sulfated glycoprotein. IL28RA encodes an interleukin receptor.&lt;h4>Conclusion&lt;/h4>Together with our earlier report, these findings may shed light on the biological basis of TESI and may help identify patients at increased risk of this potentially serious adverse event.</pubmed_abstract><journal>Pharmacogenetics and genomics</journal><pubmed_title>Genome-wide association study of suicidal ideation emerging during citalopram treatment of depressed outpatients.</pubmed_title><pmcid>PMC2819190</pmcid><funding_grant_id>Z99 MH999999</funding_grant_id><funding_grant_id>N01MH90003</funding_grant_id><funding_grant_id>K25 HL077663</funding_grant_id><funding_grant_id>1K25-077663</funding_grant_id><pubmed_authors>Akula N</pubmed_authors><pubmed_authors>Allen AS</pubmed_authors><pubmed_authors>John Rush A</pubmed_authors><pubmed_authors>Manji H</pubmed_authors><pubmed_authors>McMahon FJ</pubmed_authors><pubmed_authors>Laje G</pubmed_authors><view_count>49</view_count></additional><is_claimable>false</is_claimable><name>Genome-wide association study of suicidal ideation emerging during citalopram treatment of depressed outpatients.</name><description>&lt;h4>Objectives&lt;/h4>Suicidal ideation is an uncommon but worrisome symptom than can emerge during antidepressant treatment. We have described earlier the association between treatment-emergent suicidal ideation (TESI) and markers in genes encoding glutamate receptor subunits GRIK2 and GRIA3. The present genome-wide association study was conducted to identify additional genetic markers associated with TESI that may help identify individuals at high risk who may benefit from closer monitoring, alternative treatments, and/or specialty care.&lt;h4>Methods&lt;/h4>A clinically representative cohort of outpatients with nonpsychotic major depressive disorder enrolled in the Sequenced Treatment Alternatives to Relieve Depression (STAR*D) trial were treated with citalopram under a standard protocol for up to 14 weeks. DNA samples from 90 White participants who developed TESI and a sex-matched and race-matched equal number of treated participants who denied any suicidal ideas were genotyped with 109 365 single nucleotide polymorphisms on the Illumina's Human-1 BeadChip.&lt;h4>Results&lt;/h4>One marker was found to be associated with TESI in this sample at the experiment-wide adjusted P less than 0.05 level (marker rs11628713, allelic P = 6.2x10, odds ratio = 4.7, permutation P = 0.01). A second marker was associated at the experiment-wide adjusted P = 0.06 level (rs10903034, allelic P = 3.02x10, odds ratio = 2.7, permutation P = 0.06). These markers reside within the genes PAPLN and IL28RA, respectively. PAPLN encodes papilin, a protoglycan-like sulfated glycoprotein. IL28RA encodes an interleukin receptor.&lt;h4>Conclusion&lt;/h4>Together with our earlier report, these findings may shed light on the biological basis of TESI and may help identify patients at increased risk of this potentially serious adverse event.</description><dates><release>2009-01-01T00:00:00Z</release><publication>2009 Sep</publication><modification>2024-11-20T14:01:22.689Z</modification><creation>2019-03-27T00:28:28Z</creation></dates><accession>S-EPMC2819190</accession><cross_references><pubmed>19724244</pubmed><doi>10.1097/fpc.0b013e32832e4bcd</doi><doi>10.1097/FPC.0b013e32832e4bcd</doi></cross_references></HashMap>