<HashMap><database>biostudies-literature</database><scores/><additional><submitter>Wang M</submitter><funding>NIGMS NIH HHS</funding><pagination>1811-22</pagination><full_dataset_link>https://www.ebi.ac.uk/biostudies/studies/S-EPMC3061060</full_dataset_link><repository>biostudies-literature</repository><omics_type>Unknown</omics_type><volume>39(5)</volume><pubmed_abstract>Ribosome biogenesis requires multiple nuclease activities to process pre-rRNA transcripts into mature rRNA species and eliminate defective products of transcription and processing. We find that in mammalian cells, the 5' exonuclease Xrn2 plays a major role in both maturation of rRNA and degradation of a variety of discarded pre-rRNA species. Precursors of 5.8S and 28S rRNAs containing 5' extensions accumulate in mouse cells after siRNA-mediated knockdown of Xrn2, indicating similarity in the 5'-end maturation mechanisms between mammals and yeast. Strikingly, degradation of many aberrant pre-rRNA species, attributed mainly to 3' exonucleases in yeast studies, occurs 5' to 3' in mammalian cells and is mediated by Xrn2. Furthermore, depletion of Xrn2 reveals pre-rRNAs derived by cleavage even</pubmed_abstract><journal>Nucleic acids research</journal><pubmed_title>5'-end surveillance by Xrn2 acts as a shared mechanism for mammalian pre-rRNA maturation and decay.</pubmed_title><pmcid>PMC3061060</pmcid><funding_grant_id>R01 GM074091-06</funding_grant_id><funding_grant_id>GM074091</funding_grant_id><funding_grant_id>R01 GM074091</funding_grant_id><pubmed_authors>Wang M</pubmed_authors><pubmed_authors>Pestov DG</pubmed_authors></additional><is_claimable>false</is_claimable><name>5'-end surveillance by Xrn2 acts as a shared mechanism for mammalian pre-rRNA maturation and decay.</name><description>Ribosome biogenesis requires multiple nuclease activities to process pre-rRNA transcripts into mature rRNA species and eliminate defective products of transcription and processing. We find that in mammalian cells, the 5' exonuclease Xrn2 plays a major role in both maturation of rRNA and degradation of a variety of discarded pre-rRNA species. Precursors of 5.8S and 28S rRNAs containing 5' extensions accumulate in mouse cells after siRNA-mediated knockdown of Xrn2, indicating similarity in the 5'-end maturation mechanisms between mammals and yeast. Strikingly, degradation of many aberrant pre-rRNA species, attributed mainly to 3' exonucleases in yeast studies, occurs 5' to 3' in mammalian cells and is mediated by Xrn2. Furthermore, depletion of Xrn2 reveals pre-rRNAs derived by cleavage even</description><dates><release>2011-01-01T00:00:00Z</release><publication>2011 Mar</publication><modification>2025-04-19T21:40:14.878Z</modification><creation>2019-03-27T00:39:55Z</creation></dates><accession>S-EPMC3061060</accession><cross_references><pubmed>21036871</pubmed><doi>10.1093/nar/gkq1050</doi></cross_references></HashMap>