<HashMap><database>biostudies-literature</database><scores/><additional><submitter>Tozawa H</submitter><funding>NHLBI NIH HHS</funding><pagination>2196-209</pagination><full_dataset_link>https://www.ebi.ac.uk/biostudies/studies/S-EPMC3133239</full_dataset_link><repository>biostudies-literature</repository><omics_type>Unknown</omics_type><volume>31(11)</volume><pubmed_abstract>Endothelial cell activation and dysfunction underlie many vascular disorders, including atherosclerosis and inflammation. Here, we show that interleukin-4 (IL-4) markedly induced vascular cell adhesion molecule 1 (VCAM-1), both in cultured endothelial cells and in the intact endothelium in mice. Combined treatment with IL-4 and tumor necrosis factor alpha (TNF-α) resulted in further, sustained induction of VCAM-1 expression. IL-4-mediated induction of VCAM-1 and secondary monocyte adhesion was predominantly regulated by the transcription factor STAT6. Genome-wide survey of IL-4-mediated STAT6 binding from sequential chromatin-immunoprecipitation with deep sequencing (chromatin immunoprecipitation sequencing [ChIP-seq]) in endothelial cells revealed regions of transient and sustained transcription factor binding. Through the combination of DNA microarrays and ChIP-seq at the same time points, the majority of IL-4-responsive genes were shown to be STAT6 dependent and associated with direct STAT6 binding to their promoter. IL-4-mediated stable binding of STAT6 led to sustained target gene expression. Moreover, our strategy led to the identification of a novel functionally important STAT6 binding site within 16 kb upstream of the VCAM-1 gene. Taken together, these findings support a critical role for STAT6 in mediating IL-4 signal transduction in endothelial cells. Identification of a novel IL-4-mediated VCAM-1 enhancer may provide a foundation for targeted therapy in vascular disease.</pubmed_abstract><journal>Molecular and cellular biology</journal><pubmed_title>Genome-wide approaches reveal functional interleukin-4-inducible STAT6 binding to the vascular cell adhesion molecule 1 promoter.</pubmed_title><pmcid>PMC3133239</pmcid><funding_grant_id>HL076540</funding_grant_id><funding_grant_id>HL082927</funding_grant_id><funding_grant_id>R01 HL082927</funding_grant_id><funding_grant_id>P01 HL076540</funding_grant_id><pubmed_authors>Tozawa H</pubmed_authors><pubmed_authors>Kodama T</pubmed_authors><pubmed_authors>Aird WC</pubmed_authors><pubmed_authors>Kanki Y</pubmed_authors><pubmed_authors>Aburatani H</pubmed_authors><pubmed_authors>Suehiro J</pubmed_authors><pubmed_authors>Minami T</pubmed_authors><pubmed_authors>Kohro T</pubmed_authors><pubmed_authors>Tsutsumi S</pubmed_authors><pubmed_authors>Wada Y</pubmed_authors></additional><is_claimable>false</is_claimable><name>Genome-wide approaches reveal functional interleukin-4-inducible STAT6 binding to the vascular cell adhesion molecule 1 promoter.</name><description>Endothelial cell activation and dysfunction underlie many vascular disorders, including atherosclerosis and inflammation. Here, we show that interleukin-4 (IL-4) markedly induced vascular cell adhesion molecule 1 (VCAM-1), both in cultured endothelial cells and in the intact endothelium in mice. Combined treatment with IL-4 and tumor necrosis factor alpha (TNF-α) resulted in further, sustained induction of VCAM-1 expression. IL-4-mediated induction of VCAM-1 and secondary monocyte adhesion was predominantly regulated by the transcription factor STAT6. Genome-wide survey of IL-4-mediated STAT6 binding from sequential chromatin-immunoprecipitation with deep sequencing (chromatin immunoprecipitation sequencing [ChIP-seq]) in endothelial cells revealed regions of transient and sustained transcription factor binding. Through the combination of DNA microarrays and ChIP-seq at the same time points, the majority of IL-4-responsive genes were shown to be STAT6 dependent and associated with direct STAT6 binding to their promoter. IL-4-mediated stable binding of STAT6 led to sustained target gene expression. Moreover, our strategy led to the identification of a novel functionally important STAT6 binding site within 16 kb upstream of the VCAM-1 gene. Taken together, these findings support a critical role for STAT6 in mediating IL-4 signal transduction in endothelial cells. Identification of a novel IL-4-mediated VCAM-1 enhancer may provide a foundation for targeted therapy in vascular disease.</description><dates><release>2011-01-01T00:00:00Z</release><publication>2011 Jun</publication><modification>2024-11-07T03:23:20.171Z</modification><creation>2019-03-27T03:06:56Z</creation></dates><accession>S-EPMC3133239</accession><cross_references><pubmed>21464207</pubmed><doi>10.1128/MCB.01430-10</doi><doi>10.1128/mcb.01430-10</doi></cross_references></HashMap>