<HashMap><database>biostudies-literature</database><scores/><additional><omics_type>Unknown</omics_type><volume>13(6)</volume><submitter>Su ZY</submitter><pubmed_abstract>Modeling of the RadA family mechanism is crucial to understanding the DNA SOS repair process. In a 2007 report, the archaeal RadA proteins function as rotary motors (linker region: I71-K88) such as shown in Figure 1. Molecular simulations approaches help to shed further light onto this phenomenon. We find 11 rotary residues (R72, T75-K81, M84, V86 and K87) and five zero rotary residues (I71, K74, E82, R83 and K88) in the simulations. Inclusion of our simulations may help to understand the RadA family mechanism.</pubmed_abstract><journal>International journal of molecular sciences</journal><pagination>7138-7148</pagination><full_dataset_link>https://www.ebi.ac.uk/biostudies/studies/S-EPMC3397515</full_dataset_link><repository>biostudies-literature</repository><pubmed_title>Target molecular simulations of RecA family protein filaments.</pubmed_title><pmcid>PMC3397515</pmcid><pubmed_authors>Lee WJ</pubmed_authors><pubmed_authors>Wang YT</pubmed_authors><pubmed_authors>Su ZY</pubmed_authors><pubmed_authors>Su WS</pubmed_authors></additional><is_claimable>false</is_claimable><name>Target molecular simulations of RecA family protein filaments.</name><description>Modeling of the RadA family mechanism is crucial to understanding the DNA SOS repair process. In a 2007 report, the archaeal RadA proteins function as rotary motors (linker region: I71-K88) such as shown in Figure 1. Molecular simulations approaches help to shed further light onto this phenomenon. We find 11 rotary residues (R72, T75-K81, M84, V86 and K87) and five zero rotary residues (I71, K74, E82, R83 and K88) in the simulations. Inclusion of our simulations may help to understand the RadA family mechanism.</description><dates><release>2012-01-01T00:00:00Z</release><publication>2012</publication><modification>2024-02-16T03:17:32.921Z</modification><creation>2019-03-27T00:55:39Z</creation></dates><accession>S-EPMC3397515</accession><cross_references><pubmed>22837683</pubmed><doi>10.3390/ijms13067138</doi></cross_references></HashMap>