<HashMap><database>biostudies-literature</database><scores/><additional><submitter>Kiaii S</submitter><funding>National Institute for Health Research (NIHR)</funding><funding>NCI NIH HHS</funding><pagination>2654-61</pagination><full_dataset_link>https://www.ebi.ac.uk/biostudies/studies/S-EPMC3709054</full_dataset_link><repository>biostudies-literature</repository><omics_type>Unknown</omics_type><volume>31(21)</volume><pubmed_abstract>&lt;h4>Purpose&lt;/h4>Previous studies have demonstrated the prognostic importance of the immune microenvironment in follicular lymphoma (FL). To investigate the molecular mechanisms during which tumor-infiltrating T cells (TILs) are altered in the FL microenvironment, we studied highly purified CD4 and CD8 TILs from lymph node biopsies at diagnosis in treatment-naive patients with FL compared with reactive tonsils and the peripheral blood of healthy donors.&lt;h4>Patients and methods&lt;/h4>Gene expression profiling of highly purified CD4 and CD8 TILs was performed on the Affymetrix platform. Diagnostic tissue microarrays from an independent patient set (n = 172) were used to verify protein expression and analyze any impact of TIL-expressed genes on outcome. Time-lapse imaging was used to assess T-ce</pubmed_abstract><journal>Journal of clinical oncology : official journal of the American Society of Clinical Oncology</journal><pubmed_title>Follicular lymphoma cells induce changes in T-cell gene expression and function: potential impact on survival and risk of transformation.</pubmed_title><pmcid>PMC3709054</pmcid><funding_grant_id>P01 CA081534</funding_grant_id><funding_grant_id>CL-2007-19-002</funding_grant_id><pubmed_authors>Neuberg DS</pubmed_authors><pubmed_authors>Lee A</pubmed_authors><pubmed_authors>Sangaralingam A</pubmed_authors><pubmed_authors>Calaminici M</pubmed_authors><pubmed_authors>Gribben JG</pubmed_authors><pubmed_authors>Clear AJ</pubmed_authors><pubmed_authors>Ramsay AG</pubmed_authors><pubmed_authors>Davies D</pubmed_authors><pubmed_authors>Kiaii S</pubmed_authors></additional><is_claimable>false</is_claimable><name>Follicular lymphoma cells induce changes in T-cell gene expression and function: potential impact on survival and risk of transformation.</name><description>&lt;h4>Purpose&lt;/h4>Previous studies have demonstrated the prognostic importance of the immune microenvironment in follicular lymphoma (FL). To investigate the molecular mechanisms during which tumor-infiltrating T cells (TILs) are altered in the FL microenvironment, we studied highly purified CD4 and CD8 TILs from lymph node biopsies at diagnosis in treatment-naive patients with FL compared with reactive tonsils and the peripheral blood of healthy donors.&lt;h4>Patients and methods&lt;/h4>Gene expression profiling of highly purified CD4 and CD8 TILs was performed on the Affymetrix platform. Diagnostic tissue microarrays from an independent patient set (n = 172) were used to verify protein expression and analyze any impact of TIL-expressed genes on outcome. Time-lapse imaging was used to assess T-ce</description><dates><release>2013-01-01T00:00:00Z</release><publication>2013 Jul</publication><modification>2026-06-04T17:16:19.675Z</modification><creation>2019-03-26T22:59:43Z</creation></dates><accession>S-EPMC3709054</accession><cross_references><pubmed>23775959</pubmed><doi>10.1200/JCO.2012.44.2137</doi><doi>10.1200/jco.2012.44.2137</doi></cross_references></HashMap>