{"database":"biostudies-literature","file_versions":[],"scores":null,"additional":{"omics_type":["Unknown"],"volume":["9(1)"],"submitter":["Hiley L"],"pubmed_abstract":["Salmonella isolates harbour a range of resident prophages which can influence their virulence and ability to compete and survive in their environment. Phage gene profiling of a range of phage types of Salmonella enterica subsp. enterica serovar Typhimurium (S. Typhimurium) indicates a significant level of correlation of phage gene profile with phage type as well as correlation with genotypes determined by a combination of multi-locus variable-number tandem repeat (VNTR) typing and clustered regularly interspaced short palindromic repeats (CRISPR) typing. Variation in phage gene profiles appears to be partly linked to differences in composition of variants of known prophages. We therefore conducted a study of the distribution of variants of ST64B and Gifsy-1 prophages and coincidently the p"],"journal":["PloS one"],"pagination":["e86203"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/S-EPMC3901673"],"repository":["biostudies-literature"],"pubmed_title":["Distribution of Gifsy-3 and of variants of ST64B and Gifsy-1 prophages amongst Salmonella enterica Serovar Typhimurium isolates: evidence that combinations of prophages promote clonality."],"pmcid":["PMC3901673"],"pubmed_authors":["Fang NX","Hiley L","Micalizzi GR","Bates J"],"additional_accession":[]},"is_claimable":false,"name":"Distribution of Gifsy-3 and of variants of ST64B and Gifsy-1 prophages amongst Salmonella enterica Serovar Typhimurium isolates: evidence that combinations of prophages promote clonality.","description":"Salmonella isolates harbour a range of resident prophages which can influence their virulence and ability to compete and survive in their environment. Phage gene profiling of a range of phage types of Salmonella enterica subsp. enterica serovar Typhimurium (S. Typhimurium) indicates a significant level of correlation of phage gene profile with phage type as well as correlation with genotypes determined by a combination of multi-locus variable-number tandem repeat (VNTR) typing and clustered regularly interspaced short palindromic repeats (CRISPR) typing. Variation in phage gene profiles appears to be partly linked to differences in composition of variants of known prophages. We therefore conducted a study of the distribution of variants of ST64B and Gifsy-1 prophages and coincidently the p","dates":{"release":"2014-01-01T00:00:00Z","publication":"2014","modification":"2026-05-02T14:10:29.626Z","creation":"2019-03-26T23:21:32Z"},"accession":"S-EPMC3901673","cross_references":{"pubmed":["24475087"],"doi":["10.1371/journal.pone.0086203"]}}