<HashMap><database>biostudies-literature</database><scores/><additional><submitter>Korecka M</submitter><funding>NIA NIH HHS</funding><funding>NINDS NIH HHS</funding><pagination>441-51</pagination><full_dataset_link>https://www.ebi.ac.uk/biostudies/studies/S-EPMC4159707</full_dataset_link><repository>biostudies-literature</repository><omics_type>Unknown</omics_type><volume>41(2)</volume><pubmed_abstract>The primary aims of this work were to: 1) establish a calibrator surrogate matrix for quantification of amyloid-? (A?)42 in human cerebrospinal fluid (CSF) and preparation of quality control samples for LC-MS-MS methodology, 2) validate analytical performance of the assay, and 3) evaluate its diagnostic utility and compare it with the AlzBio3 immunoassay. The analytical methodology was based on a 2D-UPLC-MS-MS platform. Sample pretreatment used 5 M guanidine hydrochloride and extraction on ?Elution SPE columns as previously described. A column cleaning procedure involved gradual removal of aqueous solvents by acetonitrile assured consistent long-term chromatography performance. Receiver-operator characteristic (ROC) curve and correlation analyses evaluated the diagnostic utility of UPLC-MS-MS compared to AlzBio3 immunoassay for detection of Alzheimer's disease (AD). The surrogate matrix, artificial CSF containing 4 mg/mL of BSA, provides linear and reproducible calibration comparable to human pooled CSF as calibration matrix. Appropriate cleaning of the trapping and analytical columns provided every-day, trouble-free runs. Analyses of CSF A?42 showed that UPLC-MS-MS distinguished neuropathologically-diagnosed AD subjects from healthy controls with at least equivalent diagnostic utility to AlzBio3. Comparison of ROC curves for these two assays showed no statistically significant difference (p = 0.2229). Linear regression analysis of A?42 concentrations measured by this mass spectrometry-based method compared to the AlzBio3 immunoassay showed significantly higher but highly correlated results. In conclusion, the newly established surrogate matrix for 2D-UPLC-MS-MS measurement of A?42 provides selective, reproducible, and accurate results. The documented analytical performance and diagnostic performance for AD versus controls supports consideration as a candidate reference method.</pubmed_abstract><journal>Journal of Alzheimer's disease : JAD</journal><pubmed_title>Qualification of a surrogate matrix-based absolute quantification method for amyloid-??? in human cerebrospinal fluid using 2D UPLC-tandem mass spectrometry.</pubmed_title><pmcid>PMC4159707</pmcid><funding_grant_id>P30 AG010124</funding_grant_id><funding_grant_id>NS053488</funding_grant_id><funding_grant_id>AG10124</funding_grant_id><funding_grant_id>AG024904</funding_grant_id><funding_grant_id>U01 AG024904</funding_grant_id><funding_grant_id>P50 NS053488</funding_grant_id><pubmed_authors>Grossman M</pubmed_authors><pubmed_authors>Arnold SE</pubmed_authors><pubmed_authors>Trojanowski JQ</pubmed_authors><pubmed_authors>Waligorska T</pubmed_authors><pubmed_authors>Figurski M</pubmed_authors><pubmed_authors>Korecka M</pubmed_authors><pubmed_authors>Toledo JB</pubmed_authors><pubmed_authors>Shaw LM</pubmed_authors></additional><is_claimable>false</is_claimable><name>Qualification of a surrogate matrix-based absolute quantification method for amyloid-??? in human cerebrospinal fluid using 2D UPLC-tandem mass spectrometry.</name><description>The primary aims of this work were to: 1) establish a calibrator surrogate matrix for quantification of amyloid-? (A?)42 in human cerebrospinal fluid (CSF) and preparation of quality control samples for LC-MS-MS methodology, 2) validate analytical performance of the assay, and 3) evaluate its diagnostic utility and compare it with the AlzBio3 immunoassay. The analytical methodology was based on a 2D-UPLC-MS-MS platform. Sample pretreatment used 5 M guanidine hydrochloride and extraction on ?Elution SPE columns as previously described. A column cleaning procedure involved gradual removal of aqueous solvents by acetonitrile assured consistent long-term chromatography performance. Receiver-operator characteristic (ROC) curve and correlation analyses evaluated the diagnostic utility of UPLC-MS-MS compared to AlzBio3 immunoassay for detection of Alzheimer's disease (AD). The surrogate matrix, artificial CSF containing 4 mg/mL of BSA, provides linear and reproducible calibration comparable to human pooled CSF as calibration matrix. Appropriate cleaning of the trapping and analytical columns provided every-day, trouble-free runs. Analyses of CSF A?42 showed that UPLC-MS-MS distinguished neuropathologically-diagnosed AD subjects from healthy controls with at least equivalent diagnostic utility to AlzBio3. Comparison of ROC curves for these two assays showed no statistically significant difference (p = 0.2229). Linear regression analysis of A?42 concentrations measured by this mass spectrometry-based method compared to the AlzBio3 immunoassay showed significantly higher but highly correlated results. In conclusion, the newly established surrogate matrix for 2D-UPLC-MS-MS measurement of A?42 provides selective, reproducible, and accurate results. The documented analytical performance and diagnostic performance for AD versus controls supports consideration as a candidate reference method.</description><dates><release>2014-01-01T00:00:00Z</release><publication>2014</publication><modification>2020-10-31T08:43:12Z</modification><creation>2019-03-27T01:35:29Z</creation></dates><accession>S-EPMC4159707</accession><cross_references><pubmed>24625802</pubmed><doi>10.3233/jad-132489</doi><doi>10.3233/JAD-132489</doi></cross_references></HashMap>