{"database":"biostudies-literature","file_versions":[],"scores":null,"additional":{"omics_type":["Unknown"],"volume":["80(21)"],"submitter":["Dalvi S"],"pubmed_abstract":["Arhodomonas sp. strain Seminole was isolated from a crude oil-impacted brine soil and shown to degrade benzene, toluene, phenol, 4-hydroxybenzoic acid (4-HBA), protocatechuic acid (PCA), and phenylacetic acid (PAA) as the sole sources of carbon at high salinity. Seminole is a member of the genus Arhodomonas in the class Gammaproteobacteria, sharing 96% 16S rRNA gene sequence similarity with Arhodomonas aquaeolei HA-1. Analysis of the genome predicted a number of catabolic genes for the metabolism of benzene, toluene, 4-HBA, and PAA. The predicted pathways were corroborated by identification of enzymes present in the cytosolic proteomes of cells grown on aromatic compounds using liquid chromatography-mass spectrometry. Genome analysis predicted a cluster of 19 genes necessary for the breakd"],"journal":["Applied and environmental microbiology"],"pagination":["6664-76"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/S-EPMC4249047"],"repository":["biostudies-literature"],"pubmed_title":["Arhodomonas sp. strain Seminole and its genetic potential to degrade aromatic compounds under high-salinity conditions."],"pmcid":["PMC4249047"],"pubmed_authors":["Roe BA","Hartson SD","Najar F","Fathepure BZ","Dalvi S","Canaan P","Nicholson C"],"additional_accession":[]},"is_claimable":false,"name":"Arhodomonas sp. strain Seminole and its genetic potential to degrade aromatic compounds under high-salinity conditions.","description":"Arhodomonas sp. strain Seminole was isolated from a crude oil-impacted brine soil and shown to degrade benzene, toluene, phenol, 4-hydroxybenzoic acid (4-HBA), protocatechuic acid (PCA), and phenylacetic acid (PAA) as the sole sources of carbon at high salinity. Seminole is a member of the genus Arhodomonas in the class Gammaproteobacteria, sharing 96% 16S rRNA gene sequence similarity with Arhodomonas aquaeolei HA-1. Analysis of the genome predicted a number of catabolic genes for the metabolism of benzene, toluene, 4-HBA, and PAA. The predicted pathways were corroborated by identification of enzymes present in the cytosolic proteomes of cells grown on aromatic compounds using liquid chromatography-mass spectrometry. Genome analysis predicted a cluster of 19 genes necessary for the breakd","dates":{"release":"2014-01-01T00:00:00Z","publication":"2014 Nov","modification":"2026-05-03T11:02:04.474Z","creation":"2019-03-27T01:40:34Z"},"accession":"S-EPMC4249047","cross_references":{"pubmed":["25149520"],"doi":["10.1128/aem.01509-14","10.1128/AEM.01509-14"]}}