{"database":"biostudies-literature","file_versions":[],"scores":null,"additional":{"submitter":["Gilmore SA"],"funding":["Howard Hughes Medical Institute","NIAID NIH HHS"],"pagination":["e1005395"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/S-EPMC4503680"],"repository":["biostudies-literature"],"omics_type":["Unknown"],"volume":["11(7)"],"pubmed_abstract":["Eukaryotic cells integrate layers of gene regulation to coordinate complex cellular processes; however, mechanisms of post-transcriptional gene regulation remain poorly studied. The human fungal pathogen Histoplasma capsulatum (Hc) responds to environmental or host temperature by initiating unique transcriptional programs to specify multicellular (hyphae) or unicellular (yeast) developmental states that function in infectivity or pathogenesis, respectively. Here we used recent advances in next-generation sequencing to uncover a novel re-programming of transcript length between Hc developmental cell types. We found that ~2% percent of Hc transcripts exhibit 5' leader sequences that differ markedly in length between morphogenetic states. Ribosome density and mRNA abundance measurements of di"],"journal":["PLoS genetics"],"pubmed_title":["Genome-Wide Reprogramming of Transcript Architecture by Temperature Specifies the Developmental States of the Human Pathogen Histoplasma."],"pmcid":["PMC4503680"],"funding_grant_id":["T32AI07334","NIH R01AI066224","R01 AI066224","T32 AI007334","R37 AI066224","T32 AI060537"],"pubmed_authors":["Sil A","Voorhies M","Gilmore SA","Gebhart D"],"additional_accession":[]},"is_claimable":false,"name":"Genome-Wide Reprogramming of Transcript Architecture by Temperature Specifies the Developmental States of the Human Pathogen Histoplasma.","description":"Eukaryotic cells integrate layers of gene regulation to coordinate complex cellular processes; however, mechanisms of post-transcriptional gene regulation remain poorly studied. The human fungal pathogen Histoplasma capsulatum (Hc) responds to environmental or host temperature by initiating unique transcriptional programs to specify multicellular (hyphae) or unicellular (yeast) developmental states that function in infectivity or pathogenesis, respectively. Here we used recent advances in next-generation sequencing to uncover a novel re-programming of transcript length between Hc developmental cell types. We found that ~2% percent of Hc transcripts exhibit 5' leader sequences that differ markedly in length between morphogenetic states. Ribosome density and mRNA abundance measurements of di","dates":{"release":"2015-01-01T00:00:00Z","publication":"2015 Jul","modification":"2026-04-08T17:14:22.5Z","creation":"2019-03-26T22:46:00Z"},"accession":"S-EPMC4503680","cross_references":{"pubmed":["26177267"],"doi":["10.1371/journal.pgen.1005395"]}}