<HashMap><database>biostudies-literature</database><scores/><additional><submitter>Jimenez-Lopez JC</submitter><funding>European Regional Development Fund</funding><pagination>4946872</pagination><full_dataset_link>https://www.ebi.ac.uk/biostudies/studies/S-EPMC4789380</full_dataset_link><repository>biostudies-literature</repository><omics_type>Unknown</omics_type><volume>2016</volume><pubmed_abstract>Olive seeds, which are a raw material of interest, have been reported to contain 11S seed storage proteins (SSPs). However, the presence of SSPs such as 7S vicilins has not been studied. In this study, following a search in the olive seed transcriptome, 58 sequences corresponding to 7S vicilins were retrieved. A partial sequence was amplified by PCR from olive seed cDNA and subjected to phylogenetic analysis with other sequences. Structural analysis showed that olive 7S vicilin contains 9 α-helixes and 22 β-sheets. Additionally, 3D structural analysis displayed good superimposition with vicilin models generated from Pistacia and Sesamum. In order to assess potential allergenicity, T and B epitopes present in these proteins were identified by bioinformatic approaches. Different motifs were </pubmed_abstract><journal>BioMed research international</journal><pubmed_title>Identification and Assessment of the Potential Allergenicity of 7S Vicilins in Olive (Olea europaea L.) Seeds.</pubmed_title><pmcid>PMC4789380</pmcid><funding_grant_id>RYC-2014-16536</funding_grant_id><funding_grant_id>PIOF-GA-2011-311550</funding_grant_id><funding_grant_id>P2010-AGR-6274</funding_grant_id><funding_grant_id>P2011-CVI-7487</funding_grant_id><pubmed_authors>Alche Jde D</pubmed_authors><pubmed_authors>Zafra A</pubmed_authors><pubmed_authors>Palanco L</pubmed_authors><pubmed_authors>Jimenez-Lopez JC</pubmed_authors><pubmed_authors>Florido JF</pubmed_authors></additional><is_claimable>false</is_claimable><name>Identification and Assessment of the Potential Allergenicity of 7S Vicilins in Olive (Olea europaea L.) Seeds.</name><description>Olive seeds, which are a raw material of interest, have been reported to contain 11S seed storage proteins (SSPs). However, the presence of SSPs such as 7S vicilins has not been studied. In this study, following a search in the olive seed transcriptome, 58 sequences corresponding to 7S vicilins were retrieved. A partial sequence was amplified by PCR from olive seed cDNA and subjected to phylogenetic analysis with other sequences. Structural analysis showed that olive 7S vicilin contains 9 α-helixes and 22 β-sheets. Additionally, 3D structural analysis displayed good superimposition with vicilin models generated from Pistacia and Sesamum. In order to assess potential allergenicity, T and B epitopes present in these proteins were identified by bioinformatic approaches. Different motifs were </description><dates><release>2016-01-01T00:00:00Z</release><publication>2016</publication><modification>2025-04-20T02:37:01.146Z</modification><creation>2019-06-06T15:33:56Z</creation></dates><accession>S-EPMC4789380</accession><cross_references><pubmed>27034939</pubmed><doi>10.1155/2016/4946872</doi></cross_references></HashMap>