<HashMap><database>biostudies-literature</database><scores/><additional><submitter>Perez-Santiago J</submitter><funding>NIDA NIH HHS</funding><funding>NCRR NIH HHS</funding><funding>NIAID NIH HHS</funding><funding>NIMH NIH HHS</funding><pagination>191-200</pagination><full_dataset_link>https://www.ebi.ac.uk/biostudies/studies/S-EPMC4862614</full_dataset_link><repository>biostudies-literature</repository><omics_type>Unknown</omics_type><volume>22(2)</volume><pubmed_abstract>Cell-free mitochondiral DNA (mtDNA) is an immunogenic molecule associated with many inflammatory conditions. We evaluated the relationship between cell-free mtDNA in cerebrospinal fluid (CSF) and neurocognitive performance and inflammation during HIV infection. In a cross-sectional analysis, we evaluated the association of mtDNA levels with clinical assessments, inflammatory markers, and neurocognitive performance in 28 HIV-infected individuals. In CSF, we measured mtDNA levels by droplet digital PCR, and soluble CD14 and CD163, neurofilament light, and neopterin by ELISA. In blood and CSF, we measured soluble IP-10, MCP-1, TNF-α, and IL-6 by ELISA, and intracellular expression of IL-2, IFN-γ, and TNF-α in CD4(+) and CD8(+) T cells by flow cytometry. We also evaluated the relationship betw</pubmed_abstract><journal>Journal of neurovirology</journal><pubmed_title>Cell-free mitochondrial DNA in CSF is associated with early viral rebound, inflammation, and severity of neurocognitive deficits in HIV infection.</pubmed_title><pmcid>PMC4862614</pmcid><funding_grant_id>P50 DA026306</funding_grant_id><funding_grant_id>P30 MH062512</funding_grant_id><funding_grant_id>K24 MH097673</funding_grant_id><funding_grant_id>K24 AI100665</funding_grant_id><funding_grant_id>DA026306</funding_grant_id><funding_grant_id>AI100665</funding_grant_id><funding_grant_id>S10 RR031646</funding_grant_id><funding_grant_id>AI036214</funding_grant_id><funding_grant_id>MH101012</funding_grant_id><funding_grant_id>MH081482</funding_grant_id><funding_grant_id>R25 MH081482</funding_grant_id><funding_grant_id>MH062512</funding_grant_id><funding_grant_id>1S10RR031646-01</funding_grant_id><funding_grant_id>T32 AI007384</funding_grant_id><funding_grant_id>P30 AI036214</funding_grant_id><funding_grant_id>K23 AI055276</funding_grant_id><funding_grant_id>DP1 DA034978</funding_grant_id><funding_grant_id>AI007384</funding_grant_id><funding_grant_id>AI093163</funding_grant_id><funding_grant_id>K23 AI093163</funding_grant_id><funding_grant_id>R01 MH101012</funding_grant_id><funding_grant_id>MH097673</funding_grant_id><pubmed_authors>Schrier RD</pubmed_authors><pubmed_authors>Perez-Santiago J</pubmed_authors><pubmed_authors>Massanella M</pubmed_authors><pubmed_authors>Suben JD</pubmed_authors><pubmed_authors>Cherner M</pubmed_authors><pubmed_authors>Smith DM</pubmed_authors><pubmed_authors>Ramirez-Gaona M</pubmed_authors><pubmed_authors>Murrell B</pubmed_authors><pubmed_authors>Ellis RJ</pubmed_authors><pubmed_authors>Gianella S</pubmed_authors><pubmed_authors>de Oliveira MF</pubmed_authors><pubmed_authors>Var SR</pubmed_authors><pubmed_authors>Day TR</pubmed_authors><pubmed_authors>Mehta SR</pubmed_authors><pubmed_authors>Letendre SL</pubmed_authors></additional><is_claimable>false</is_claimable><name>Cell-free mitochondrial DNA in CSF is associated with early viral rebound, inflammation, and severity of neurocognitive deficits in HIV infection.</name><description>Cell-free mitochondiral DNA (mtDNA) is an immunogenic molecule associated with many inflammatory conditions. We evaluated the relationship between cell-free mtDNA in cerebrospinal fluid (CSF) and neurocognitive performance and inflammation during HIV infection. In a cross-sectional analysis, we evaluated the association of mtDNA levels with clinical assessments, inflammatory markers, and neurocognitive performance in 28 HIV-infected individuals. In CSF, we measured mtDNA levels by droplet digital PCR, and soluble CD14 and CD163, neurofilament light, and neopterin by ELISA. In blood and CSF, we measured soluble IP-10, MCP-1, TNF-α, and IL-6 by ELISA, and intracellular expression of IL-2, IFN-γ, and TNF-α in CD4(+) and CD8(+) T cells by flow cytometry. We also evaluated the relationship betw</description><dates><release>2016-01-01T00:00:00Z</release><publication>2016 Apr</publication><modification>2025-06-01T12:25:31.371Z</modification><creation>2019-03-27T02:13:25Z</creation></dates><accession>S-EPMC4862614</accession><cross_references><pubmed>26428514</pubmed><doi>10.1007/s13365-015-0384-5</doi></cross_references></HashMap>