<HashMap><database>biostudies-literature</database><scores><citationCount>0</citationCount><reanalysisCount>0</reanalysisCount><viewCount>47</viewCount><searchCount>0</searchCount></scores><additional><submitter>Labbe C</submitter><funding>OAR</funding><funding>Alzheimer’s Disease Research Center</funding><funding>NIA NIH HHS</funding><funding>NCRR NIH HHS</funding><funding>Mayo Clinic Neuroscience Focused Research Team</funding><funding>Mayo Clinic Center for Regenerative Medicine</funding><funding>NINDS</funding><funding>FDA HHS</funding><funding>Mayo Clinic Center for Individualized Medicine</funding><funding>PAL</funding><funding>NINDS NIH HHS</funding><funding>WS</funding><funding>Cure MSA Foundation</funding><funding>Mayo Clinic Study of Aging</funding><pagination>40-5</pagination><full_dataset_link>https://www.ebi.ac.uk/biostudies/studies/S-EPMC5007155</full_dataset_link><repository>biostudies-literature</repository><omics_type>Unknown</omics_type><volume>30</volume><pubmed_abstract>&lt;h4>Introduction&lt;/h4>Multiple system atrophy (MSA) is a rare progressive neurodegenerative disorder. MSA was originally considered exclusively sporadic but reports of association with genes such as SNCA, COQ2 and LRRK2 have demonstrated that there is a genetic contribution to the disease. MAPT has been associated with several neurodegenerative diseases and we previously reported a protective association of the MAPT H2 haplotype with MSA in 61 pathologically confirmed cases.&lt;h4>Methods&lt;/h4>In the present study, we assessed the full MAPT haplotype diversity in MSA patients using six MAPT tagging SNPs. We genotyped a total of 127 pathologically confirmed MSA cases, 86 patients with clinically diagnosed MSA and 1312 controls.&lt;h4>Results&lt;/h4>We identified four significant association signals in our pathologically confirmed cases, two from the protective haplotypes H2 (MSA:16.2%,&lt;h4>Controls&lt;/h4>22.7%, p = 0.024) and H1E (MSA:3.0%,&lt;h4>Controls&lt;/h4>9.0%, p = 0.014), and two from the rare risk haplotypes H1x (MSA:3.7%,&lt;h4>Controls&lt;/h4>1.3%, p = 0.030) and H1J (MSA:3.0%,&lt;h4>Controls&lt;/h4>0.9%, p = 0.021). We evaluated the association of MSA subtypes with the common protective H2 haplotype and found a significant difference with controls for MSA patients with some degree of MSA-C (MSA-C or MSA-mixed), for whom H2 occurred in only 8.6% of patients in our pathologically confirmed series (P &lt; 0.0001).&lt;h4>Conclusions&lt;/h4>Our findings provide further evidence that MAPT variation is associated with risk of MSA. Interestingly, our results suggest a greater effect size in the MSA-C compared to MSA-P for H2. Additional genetic studies in larger pathologically confirmed MSA series and meta-analytic studies will be needed to fully assess the role of MAPT and other genes in MSA.</pubmed_abstract><journal>Parkinsonism &amp; related disorders</journal><pubmed_title>MAPT haplotype diversity in multiple system atrophy.</pubmed_title><pmcid>PMC5007155</pmcid><funding_grant_id>R01 FD478</funding_grant_id><funding_grant_id>R01 NS078086</funding_grant_id><funding_grant_id>UL1 RR24150</funding_grant_id><funding_grant_id>P01 NS44233</funding_grant_id><funding_grant_id>P50 NS072187</funding_grant_id><funding_grant_id>U01 AG006786</funding_grant_id><funding_grant_id>R01 NS092625</funding_grant_id><funding_grant_id>R01 FD004789</funding_grant_id><funding_grant_id>P50 AG016574</funding_grant_id><funding_grant_id>U54 NS065736</funding_grant_id><funding_grant_id>K23 NS075141</funding_grant_id><funding_grant_id>P01 NS044233</funding_grant_id><funding_grant_id>UL1 RR024150</funding_grant_id><pubmed_authors>Dickson DW</pubmed_authors><pubmed_authors>Labbe C</pubmed_authors><pubmed_authors>Murray ME</pubmed_authors><pubmed_authors>Heckman MG</pubmed_authors><pubmed_authors>Fujioka S</pubmed_authors><pubmed_authors>Ross OA</pubmed_authors><pubmed_authors>Ogaki K</pubmed_authors><pubmed_authors>Sandroni P</pubmed_authors><pubmed_authors>Coon EA</pubmed_authors><pubmed_authors>Singer W</pubmed_authors><pubmed_authors>Graff-Radford NR</pubmed_authors><pubmed_authors>Petersen RC</pubmed_authors><pubmed_authors>Younkin SG</pubmed_authors><pubmed_authors>Wszolek ZK</pubmed_authors><pubmed_authors>Lorenzo-Betancor O</pubmed_authors><pubmed_authors>Cheshire WP</pubmed_authors><pubmed_authors>Uitti RJ</pubmed_authors><pubmed_authors>van Gerpen JA</pubmed_authors><pubmed_authors>Soto-Ortolaza AI</pubmed_authors><pubmed_authors>Koga S</pubmed_authors><pubmed_authors>Boeve BF</pubmed_authors><pubmed_authors>Walton RL</pubmed_authors><pubmed_authors>Low PA</pubmed_authors><view_count>47</view_count></additional><is_claimable>false</is_claimable><name>MAPT haplotype diversity in multiple system atrophy.</name><description>&lt;h4>Introduction&lt;/h4>Multiple system atrophy (MSA) is a rare progressive neurodegenerative disorder. MSA was originally considered exclusively sporadic but reports of association with genes such as SNCA, COQ2 and LRRK2 have demonstrated that there is a genetic contribution to the disease. MAPT has been associated with several neurodegenerative diseases and we previously reported a protective association of the MAPT H2 haplotype with MSA in 61 pathologically confirmed cases.&lt;h4>Methods&lt;/h4>In the present study, we assessed the full MAPT haplotype diversity in MSA patients using six MAPT tagging SNPs. We genotyped a total of 127 pathologically confirmed MSA cases, 86 patients with clinically diagnosed MSA and 1312 controls.&lt;h4>Results&lt;/h4>We identified four significant association signals in our pathologically confirmed cases, two from the protective haplotypes H2 (MSA:16.2%,&lt;h4>Controls&lt;/h4>22.7%, p = 0.024) and H1E (MSA:3.0%,&lt;h4>Controls&lt;/h4>9.0%, p = 0.014), and two from the rare risk haplotypes H1x (MSA:3.7%,&lt;h4>Controls&lt;/h4>1.3%, p = 0.030) and H1J (MSA:3.0%,&lt;h4>Controls&lt;/h4>0.9%, p = 0.021). We evaluated the association of MSA subtypes with the common protective H2 haplotype and found a significant difference with controls for MSA patients with some degree of MSA-C (MSA-C or MSA-mixed), for whom H2 occurred in only 8.6% of patients in our pathologically confirmed series (P &lt; 0.0001).&lt;h4>Conclusions&lt;/h4>Our findings provide further evidence that MAPT variation is associated with risk of MSA. Interestingly, our results suggest a greater effect size in the MSA-C compared to MSA-P for H2. Additional genetic studies in larger pathologically confirmed MSA series and meta-analytic studies will be needed to fully assess the role of MAPT and other genes in MSA.</description><dates><release>2016-01-01T00:00:00Z</release><publication>2016 Sep</publication><modification>2024-11-12T12:31:23.677Z</modification><creation>2019-03-27T02:23:11Z</creation></dates><accession>S-EPMC5007155</accession><cross_references><pubmed>27374978</pubmed><doi>10.1016/j.parkreldis.2016.06.010</doi></cross_references></HashMap>