{"database":"biostudies-literature","file_versions":[],"scores":null,"additional":{"omics_type":["Unknown"],"volume":["10(5)"],"submitter":["Gomez-Consarnau L"],"pubmed_abstract":["Proteorhodopsins (PR) are light-driven proton pumps widely distributed in bacterioplankton. Although they have been thoroughly studied for more than a decade, it is still unclear how the proton motive force (pmf) generated by PR is used in most organisms. Notably, very few PR-containing bacteria show growth enhancement in the light. It has been suggested that the presence of specific functions within a genome may define the different PR-driven light responses. Thus, comparing closely related organisms that respond differently to light is an ideal setup to identify the mechanisms involved in PR light-enhanced growth. Here, we analyzed the transcriptomes of three PR-harboring Flavobacteria strains of the genus Dokdonia: Dokdonia donghaensis DSW-1(T), Dokdonia MED134 and Dokdonia PRO95, grown"],"journal":["The ISME journal"],"pagination":["1102-12"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/S-EPMC5029205"],"repository":["biostudies-literature"],"pubmed_title":["Proteorhodopsin light-enhanced growth linked to vitamin-B1 acquisition in marine Flavobacteria."],"pmcid":["PMC5029205"],"pubmed_authors":["Fuhrman JA","Gonzalez JM","Sanudo-Wilhelmy SA","Wagner-Dobler I","Riedel T","Jaenicke S","Gomez-Consarnau L"],"additional_accession":[]},"is_claimable":false,"name":"Proteorhodopsin light-enhanced growth linked to vitamin-B1 acquisition in marine Flavobacteria.","description":"Proteorhodopsins (PR) are light-driven proton pumps widely distributed in bacterioplankton. Although they have been thoroughly studied for more than a decade, it is still unclear how the proton motive force (pmf) generated by PR is used in most organisms. Notably, very few PR-containing bacteria show growth enhancement in the light. It has been suggested that the presence of specific functions within a genome may define the different PR-driven light responses. Thus, comparing closely related organisms that respond differently to light is an ideal setup to identify the mechanisms involved in PR light-enhanced growth. Here, we analyzed the transcriptomes of three PR-harboring Flavobacteria strains of the genus Dokdonia: Dokdonia donghaensis DSW-1(T), Dokdonia MED134 and Dokdonia PRO95, grown","dates":{"release":"2016-01-01T00:00:00Z","publication":"2016 May","modification":"2026-05-03T23:29:17.815Z","creation":"2019-03-27T02:24:41Z"},"accession":"S-EPMC5029205","cross_references":{"pubmed":["26574687"],"doi":["10.1038/ismej.2015.196"]}}