<HashMap><database>biostudies-literature</database><scores/><additional><submitter>Romas L</submitter><funding>NICHD NIH HHS</funding><funding>NIAID NIH HHS</funding><funding>NIMH NIH HHS</funding><funding>CIHR</funding><pagination>1005-1015</pagination><full_dataset_link>https://www.ebi.ac.uk/biostudies/studies/S-EPMC5067863</full_dataset_link><repository>biostudies-literature</repository><omics_type>Unknown</omics_type><volume>32(10-11)</volume><pubmed_abstract>Rectal use of a 1% tenofovir (TFV) gel is currently being evaluated for HIV prevention. While careful assessment of mucosal safety of candidate microbicides is a primary concern, tools to assess mucosal toxicity are limited. Mass spectrometry-based proteomics is a sensitive and high-throughput technique that can provide in-depth information on inflammation processes in biological systems. In this study, we utilized a proteomics approach to characterize mucosal responses in study participants involved in a phase 1 clinical trial of a rectal TFV-based gel. Project Gel was a phase 1 randomized (1:1), double-blind, multisite, placebo-controlled trial in which 24 participants received rectal TFV or a universal placebo [hydroxyethyl cellulose (HEC)] over a course of 8 daily doses. Rectal mucosal swabs were collected after 0, 1, and 8 doses and were analyzed by label-free tandem mass spectrometry. Differential protein expression was evaluated using a combination of paired (time-effects) and unpaired (across study arm) t-tests, and multivariate [least absolute shrinkage and selection operator (LASSO)] modeling. Within the TFV arm, 7% (17/249, p &lt; .05) and 10% (25/249, p &lt; .05) of total proteins changed after 1 and 8 daily applications of TFV gel, respectively, compared to 3% (7/249, p &lt; .05) and 6% (16/249, p &lt; .05) in the HEC arm. Biofunctional analysis associated TFV use with a decrease in epidermal barrier proteins (adj. p = 1.21 × 10&lt;sup>-10&lt;/sup>). Multivariate modeling identified 13 proteins that confidently separated TFV gel users (100% calibration and 96% cross-validation accuracy), including the epithelial integrity factors (FLMNB, CRNN, CALM), serpins (SPB13, SPB5), and cytoskeletal proteins (VILI, VIME, WRD1). This study suggested that daily rectal applications of a 1% TFV gel may be associated with mucosal proteome changes involving epidermal development. Further assessment of more extended use of TFV-gel is recommended to validate these initial associations.</pubmed_abstract><journal>AIDS research and human retroviruses</journal><pubmed_title>Rectal 1% Tenofovir Gel Use Associates with Altered Epidermal Protein Expression.</pubmed_title><pmcid>PMC5067863</pmcid><funding_grant_id>R01 HD059533</funding_grant_id><funding_grant_id>UM1 AI069415</funding_grant_id><funding_grant_id>P30 MH043520</funding_grant_id><funding_grant_id>OCB134115</funding_grant_id><pubmed_authors>Abou M</pubmed_authors><pubmed_authors>Febo I</pubmed_authors><pubmed_authors>Carballo-Dieguez A</pubmed_authors><pubmed_authors>McGowan I</pubmed_authors><pubmed_authors>Romas L</pubmed_authors><pubmed_authors>Giguere R</pubmed_authors><pubmed_authors>Burgener A</pubmed_authors><pubmed_authors>Birse K</pubmed_authors><pubmed_authors>Cranston RD</pubmed_authors><pubmed_authors>Westmacott G</pubmed_authors><pubmed_authors>Mayer KH</pubmed_authors></additional><is_claimable>false</is_claimable><name>Rectal 1% Tenofovir Gel Use Associates with Altered Epidermal Protein Expression.</name><description>Rectal use of a 1% tenofovir (TFV) gel is currently being evaluated for HIV prevention. While careful assessment of mucosal safety of candidate microbicides is a primary concern, tools to assess mucosal toxicity are limited. Mass spectrometry-based proteomics is a sensitive and high-throughput technique that can provide in-depth information on inflammation processes in biological systems. In this study, we utilized a proteomics approach to characterize mucosal responses in study participants involved in a phase 1 clinical trial of a rectal TFV-based gel. Project Gel was a phase 1 randomized (1:1), double-blind, multisite, placebo-controlled trial in which 24 participants received rectal TFV or a universal placebo [hydroxyethyl cellulose (HEC)] over a course of 8 daily doses. Rectal mucosal swabs were collected after 0, 1, and 8 doses and were analyzed by label-free tandem mass spectrometry. Differential protein expression was evaluated using a combination of paired (time-effects) and unpaired (across study arm) t-tests, and multivariate [least absolute shrinkage and selection operator (LASSO)] modeling. Within the TFV arm, 7% (17/249, p &lt; .05) and 10% (25/249, p &lt; .05) of total proteins changed after 1 and 8 daily applications of TFV gel, respectively, compared to 3% (7/249, p &lt; .05) and 6% (16/249, p &lt; .05) in the HEC arm. Biofunctional analysis associated TFV use with a decrease in epidermal barrier proteins (adj. p = 1.21 × 10&lt;sup>-10&lt;/sup>). Multivariate modeling identified 13 proteins that confidently separated TFV gel users (100% calibration and 96% cross-validation accuracy), including the epithelial integrity factors (FLMNB, CRNN, CALM), serpins (SPB13, SPB5), and cytoskeletal proteins (VILI, VIME, WRD1). This study suggested that daily rectal applications of a 1% TFV gel may be associated with mucosal proteome changes involving epidermal development. Further assessment of more extended use of TFV-gel is recommended to validate these initial associations.</description><dates><release>2016-01-01T00:00:00Z</release><publication>2016 Oct/Nov</publication><modification>2025-04-05T15:56:00.088Z</modification><creation>2019-03-27T02:26:57Z</creation></dates><accession>S-EPMC5067863</accession><cross_references><pubmed>27316778</pubmed><doi>10.1089/AID.2015.0381</doi></cross_references></HashMap>