<HashMap><database>biostudies-literature</database><scores/><additional><submitter>Lupu DS</submitter><funding>National Institute of Diabetes and Digestive and Kidney Diseases</funding><funding>NIDDK NIH HHS</funding><funding>NIEHS NIH HHS</funding><funding>National Institutes of Health</funding><pagination>2090-2103</pagination><full_dataset_link>https://www.ebi.ac.uk/biostudies/studies/S-EPMC5388550</full_dataset_link><repository>biostudies-literature</repository><omics_type>Unknown</omics_type><volume>31(5)</volume><pubmed_abstract>Folate B&lt;sub>12&lt;/sub>-dependent remethylation of homocysteine is important, but less is understood about the importance of the alternative betaine-dependent methylation pathway-catalyzed by betaine-homocysteine methyltransferase (BHMT)-for establishing and maintaining adequate DNA methylation across the genome. We studied C57Bl/6J &lt;i>Bhmt&lt;/i> (betaine-homocysteine methyltransferase)-null mice at age 4, 12, 24, and 52 wk (&lt;i>N&lt;/i> = 8) and observed elevation of &lt;i>S&lt;/i>-adenosylhomocysteine concentrations and development of preneoplastic foci in the liver (increased placental glutathione &lt;i>S&lt;/i>-transferase and cytokeratin 8-18 activity; starting at 12 wk). At 4 wk, we identified 63 differentially methylated CpGs (DMCs; false discovery rate &lt; 5%) proximal to 81 genes (across 14 chromosomes</pubmed_abstract><journal>FASEB journal : official publication of the Federation of American Societies for Experimental Biology</journal><pubmed_title>Altered methylation of specific DNA loci in the liver of &lt;i>Bhmt&lt;/i>-null mice results in repression of &lt;i>Iqgap2&lt;/i> and &lt;i>F2rl2&lt;/i> and is associated with development of preneoplastic foci.</pubmed_title><pmcid>PMC5388550</pmcid><funding_grant_id>DK56350</funding_grant_id><funding_grant_id>P30 DK056350</funding_grant_id><funding_grant_id>P30 ES010126</funding_grant_id><pubmed_authors>Lupu DS</pubmed_authors><pubmed_authors>Pellegrini M</pubmed_authors><pubmed_authors>Orozco LD</pubmed_authors><pubmed_authors>Cullen JM</pubmed_authors><pubmed_authors>Zeisel SH</pubmed_authors><pubmed_authors>Wang Y</pubmed_authors></additional><is_claimable>false</is_claimable><name>Altered methylation of specific DNA loci in the liver of &lt;i>Bhmt&lt;/i>-null mice results in repression of &lt;i>Iqgap2&lt;/i> and &lt;i>F2rl2&lt;/i> and is associated with development of preneoplastic foci.</name><description>Folate B&lt;sub>12&lt;/sub>-dependent remethylation of homocysteine is important, but less is understood about the importance of the alternative betaine-dependent methylation pathway-catalyzed by betaine-homocysteine methyltransferase (BHMT)-for establishing and maintaining adequate DNA methylation across the genome. We studied C57Bl/6J &lt;i>Bhmt&lt;/i> (betaine-homocysteine methyltransferase)-null mice at age 4, 12, 24, and 52 wk (&lt;i>N&lt;/i> = 8) and observed elevation of &lt;i>S&lt;/i>-adenosylhomocysteine concentrations and development of preneoplastic foci in the liver (increased placental glutathione &lt;i>S&lt;/i>-transferase and cytokeratin 8-18 activity; starting at 12 wk). At 4 wk, we identified 63 differentially methylated CpGs (DMCs; false discovery rate &lt; 5%) proximal to 81 genes (across 14 chromosomes</description><dates><release>2017-01-01T00:00:00Z</release><publication>2017 May</publication><modification>2026-05-30T07:18:35.422Z</modification><creation>2019-03-26T23:33:50Z</creation></dates><accession>S-EPMC5388550</accession><cross_references><pubmed>28179424</pubmed><doi>10.1096/fj.201601169R</doi><doi>10.1096/fj.201601169r</doi></cross_references></HashMap>