{"database":"biostudies-literature","file_versions":[],"scores":null,"additional":{"omics_type":["Unknown"],"volume":["8(1)"],"submitter":["Kim NO"],"pubmed_abstract":["<h4>Objectives</h4>An atypical <i>Shigella flexneri</i> strain with a plural agglutination pattern [i.e., reacting not only with serum samples containing type antigen II but also with serum samples containing group antigens (3)4 and 7(8)] was selected for genome sequencing, with the aim of obtaining additional comparative information about such strains.<h4>Methods</h4>The genomic DNA of atypical <i>S. flexneri</i> strain NCCP 15744 was sequenced using an Ion Torrent PGM sequencing machine (Life Technologies, USA). The raw sequence data were preprocessed and reference-assembled in the CLC Assembly Cell software (version 4.0.6; CLC bio, USA).<h4>Results</h4>Ion Torrent sequencing produced 1,450,025 single reads with an average length of 144 bp, totaling ~209 Mbp. The NCCP 15744 genome is com"],"journal":["Osong public health and research perspectives"],"pagination":["78-85"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/S-EPMC5402852"],"repository":["biostudies-literature"],"pubmed_title":["Genome Sequencing Analysis of Atypical <i>Shigella flexneri</i> Isolated in Korea."],"pmcid":["PMC5402852"],"pubmed_authors":["Kawk HS","Kim NO","Jung SM","Na HY","Chung GT","Hong S"],"additional_accession":[]},"is_claimable":false,"name":"Genome Sequencing Analysis of Atypical <i>Shigella flexneri</i> Isolated in Korea.","description":"<h4>Objectives</h4>An atypical <i>Shigella flexneri</i> strain with a plural agglutination pattern [i.e., reacting not only with serum samples containing type antigen II but also with serum samples containing group antigens (3)4 and 7(8)] was selected for genome sequencing, with the aim of obtaining additional comparative information about such strains.<h4>Methods</h4>The genomic DNA of atypical <i>S. flexneri</i> strain NCCP 15744 was sequenced using an Ion Torrent PGM sequencing machine (Life Technologies, USA). The raw sequence data were preprocessed and reference-assembled in the CLC Assembly Cell software (version 4.0.6; CLC bio, USA).<h4>Results</h4>Ion Torrent sequencing produced 1,450,025 single reads with an average length of 144 bp, totaling ~209 Mbp. The NCCP 15744 genome is com","dates":{"release":"2017-01-01T00:00:00Z","publication":"2017 Feb","modification":"2026-05-05T17:12:38.678Z","creation":"2019-03-27T02:41:56Z"},"accession":"S-EPMC5402852","cross_references":{"pubmed":["28443228"],"doi":["10.24171/j.phrp.2017.8.1.11"]}}