{"database":"biostudies-literature","file_versions":[],"scores":null,"additional":{"omics_type":["Unknown"],"volume":["117(7)"],"submitter":["Gayarre J"],"pubmed_abstract":["<h4>Background</h4>Despite a high prevalence of deleterious missense variants, most studies of RAD51C ovarian cancer susceptibility gene only provide in silico pathogenicity predictions of missense changes. We identified a novel deleterious RAD51C missense variant (p.Arg312Trp) in a high-risk family, and propose a criteria to prioritise RAD51C missense changes qualifying for functional analysis.<h4>Methods</h4>To evaluate pathogenicity of p.Arg312Trp variant we used sequence homology, loss of heterozygosity (LOH) and segregation analysis, and a comprehensive functional characterisation. To define a functional-analysis prioritisation criteria, we used outputs for the known functionally confirmed deleterious and benign RAD51C missense changes from nine pathogenicity prediction algorithms.<h4"],"journal":["British journal of cancer"],"pagination":["1048-1062"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/S-EPMC5625680"],"repository":["biostudies-literature"],"pubmed_title":["Characterisation of the novel deleterious RAD51C p.Arg312Trp variant and prioritisation criteria for functional analysis of RAD51C missense changes."],"pmcid":["PMC5625680"],"pubmed_authors":["Osorio A","Gayarre J","Garcia MJ","Urioste M","Palacios J","Benitez J","Martin-Gimeno P","Paumard B","Fernandez V","Rojo A","Barroso A","de la Hoya M","Caldes T"],"additional_accession":[]},"is_claimable":false,"name":"Characterisation of the novel deleterious RAD51C p.Arg312Trp variant and prioritisation criteria for functional analysis of RAD51C missense changes.","description":"<h4>Background</h4>Despite a high prevalence of deleterious missense variants, most studies of RAD51C ovarian cancer susceptibility gene only provide in silico pathogenicity predictions of missense changes. We identified a novel deleterious RAD51C missense variant (p.Arg312Trp) in a high-risk family, and propose a criteria to prioritise RAD51C missense changes qualifying for functional analysis.<h4>Methods</h4>To evaluate pathogenicity of p.Arg312Trp variant we used sequence homology, loss of heterozygosity (LOH) and segregation analysis, and a comprehensive functional characterisation. To define a functional-analysis prioritisation criteria, we used outputs for the known functionally confirmed deleterious and benign RAD51C missense changes from nine pathogenicity prediction algorithms.<h4","dates":{"release":"2017-01-01T00:00:00Z","publication":"2017 Sep","modification":"2026-04-29T08:46:45.001Z","creation":"2019-03-26T23:57:03Z"},"accession":"S-EPMC5625680","cross_references":{"pubmed":["28829762"],"doi":["10.1038/bjc.2017.286"]}}