{"database":"biostudies-literature","file_versions":[],"scores":null,"additional":{"omics_type":["Unknown"],"volume":["6(5)"],"submitter":["Cong M"],"funding":["Natural Science Foundation of Fujian Province","National Natural Science Foundation of China","Fujian Provincial Department of Science and Technology"],"pubmed_abstract":["Shrimp is extensively cultured worldwide. Shrimp farming is suffering from a variety of diseases. Probiotics are considered to be one of the effective methods to prevent and cure shrimp diseases. Exiguobacterium arabatum W-01, a gram-positive and orange-pigmented bacterium, was isolated from the intestine of a healthy Penaeus vannamei specimen. Whole-genome sequencing revealed a genome of 2,914,854 bp, with 48.02% GC content. In total, 3,083 open reading frames (ORFs) were identified, with an average length of 843.98 bp and a mean GC content of 48.11%, accounting for 89.27% of the genome. Among these ORFs, 2,884 (93.5%) genes were classified into Clusters of Orthologous Groups (COG) families comprising 21 functional categories, and 1,650 ORFs were classified into 83 functional Kyoto Encycl"],"journal":["MicrobiologyOpen"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/S-EPMC5635162"],"repository":["biostudies-literature"],"pubmed_title":["The complete genome sequence of Exiguobacterium arabatum W-01 reveals potential probiotic functions."],"pmcid":["PMC5635162"],"funding_grant_id":["2016J05080","31502194","JA15289","31672694"],"pubmed_authors":["Yan Q","Cong M","Jiang Q","Huang L","Xu X","Su Y"],"additional_accession":[]},"is_claimable":false,"name":"The complete genome sequence of Exiguobacterium arabatum W-01 reveals potential probiotic functions.","description":"Shrimp is extensively cultured worldwide. Shrimp farming is suffering from a variety of diseases. Probiotics are considered to be one of the effective methods to prevent and cure shrimp diseases. Exiguobacterium arabatum W-01, a gram-positive and orange-pigmented bacterium, was isolated from the intestine of a healthy Penaeus vannamei specimen. Whole-genome sequencing revealed a genome of 2,914,854 bp, with 48.02% GC content. In total, 3,083 open reading frames (ORFs) were identified, with an average length of 843.98 bp and a mean GC content of 48.11%, accounting for 89.27% of the genome. Among these ORFs, 2,884 (93.5%) genes were classified into Clusters of Orthologous Groups (COG) families comprising 21 functional categories, and 1,650 ORFs were classified into 83 functional Kyoto Encycl","dates":{"release":"2017-01-01T00:00:00Z","publication":"2017 Oct","modification":"2026-04-16T19:04:33.677Z","creation":"2019-03-27T02:58:38Z"},"accession":"S-EPMC5635162","cross_references":{"pubmed":["28589562"],"doi":["10.1002/mbo3.496"]}}