<HashMap><database>biostudies-literature</database><scores/><additional><submitter>Rannikmae K</submitter><funding>NCATS NIH HHS</funding><funding>NIA NIH HHS</funding><funding>NIDDK NIH HHS</funding><funding>NHLBI NIH HHS</funding><funding>National Institute for Health Research (NIHR)</funding><funding>NINDS NIH HHS</funding><pagination>1829-1839</pagination><full_dataset_link>https://www.ebi.ac.uk/biostudies/studies/S-EPMC5664302</full_dataset_link><repository>biostudies-literature</repository><omics_type>Unknown</omics_type><volume>89(17)</volume><pubmed_abstract>&lt;h4>Objective&lt;/h4>To determine whether common variants in familial cerebral small vessel disease (SVD) genes confer risk of sporadic cerebral SVD.&lt;h4>Methods&lt;/h4>We meta-analyzed genotype data from individuals of European ancestry to determine associations of common single nucleotide polymorphisms (SNPs) in 6 familial cerebral SVD genes (&lt;i>COL4A1&lt;/i>, &lt;i>COL4A2&lt;/i>, &lt;i>NOTCH3&lt;/i>, &lt;i>HTRA1&lt;/i>, &lt;i>TREX1&lt;/i>, and &lt;i>CECR1&lt;/i>) with intracerebral hemorrhage (ICH) (deep, lobar, all; 1,878 cases, 2,830 controls) and ischemic stroke (IS) (lacunar, cardioembolic, large vessel disease, all; 19,569 cases, 37,853 controls). We applied data quality filters and set statistical significance thresholds accounting for linkage disequilibrium and multiple testing.&lt;h4>Results&lt;/h4>A locus in &lt;i>COL4A2&lt;/i> </pubmed_abstract><journal>Neurology</journal><pubmed_title>&lt;i>COL4A2&lt;/i> is associated with lacunar ischemic stroke and deep ICH: Meta-analyses among 21,500 cases and 40,600 controls.</pubmed_title><pmcid>PMC5664302</pmcid><funding_grant_id>U01 NS069208</funding_grant_id><funding_grant_id>U01 AG009740</funding_grant_id><funding_grant_id>K23 NS086873</funding_grant_id><funding_grant_id>U01 NS036695</funding_grant_id><funding_grant_id>UL1 TR001863</funding_grant_id><funding_grant_id>KL2 TR001429</funding_grant_id><funding_grant_id>R01 NS082285</funding_grant_id><funding_grant_id>NF-SI-0512-10019</funding_grant_id><funding_grant_id>R01 NS059727</funding_grant_id><funding_grant_id>P30 DK072488</funding_grant_id><funding_grant_id>K23 NS064052</funding_grant_id><funding_grant_id>K23 NS100816</funding_grant_id><funding_grant_id>R01 HL088521</funding_grant_id><funding_grant_id>R01 NS086905</funding_grant_id><pubmed_authors>Kappelle LJ</pubmed_authors><pubmed_authors>Psaty BM</pubmed_authors><pubmed_authors>Wei-Min Chen F</pubmed_authors><pubmed_authors>Maguire J</pubmed_authors><pubmed_authors>Sacco RL</pubmed_authors><pubmed_authors>Wood NW</pubmed_authors><pubmed_authors>Seiler S</pubmed_authors><pubmed_authors>Mathew CG</pubmed_authors><pubmed_authors>Mosley TH</pubmed_authors><pubmed_authors>Wiggins KL</pubmed_authors><pubmed_authors>Rost NS</pubmed_authors><pubmed_authors>Anderson CD</pubmed_authors><pubmed_authors>Wang XQ</pubmed_authors><pubmed_authors>Bsc CS</pubmed_authors><pubmed_authors>Holliday EG</pubmed_authors><pubmed_authors>Gwinn K</pubmed_authors><pubmed_authors>Trembath RC</pubmed_authors><pubmed_authors>Weir DR</pubmed_authors><pubmed_authors>Woo D</pubmed_authors><pubmed_authors>Hankey GJ</pubmed_authors><pubmed_authors>Blackwell JM</pubmed_authors><pubmed_authors>Poole D</pubmed_authors><pubmed_authors>Cuadrado-Godia E</pubmed_authors><pubmed_authors>Xu H</pubmed_authors><pubmed_authors>Bartz TM</pubmed_authors><pubmed_authors>Strauch K</pubmed_authors><pubmed_authors>Palmer CN</pubmed_authors><pubmed_authors>Sparks MJ</pubmed_authors><pubmed_authors>Berger K</pubmed_authors><pubmed_authors>Gretarsdottir S</pubmed_authors><pubmed_authors>Redfors P</pubmed_authors><pubmed_authors>Jackson RD</pubmed_authors><pubmed_authors>Thorsteinsdottir U</pubmed_authors><pubmed_authors>Wloch-Kopec D</pubmed_authors><pubmed_authors>Schmidt CO</pubmed_authors><pubmed_authors>Kardia SL</pubmed_authors><pubmed_authors>Waldenberger M</pubmed_authors><pubmed_authors>Schurks M</pubmed_authors><pubmed_authors>Zhao W</pubmed_authors><pubmed_authors>Battey T</pubmed_authors><pubmed_authors>Thorsteindottir U</pubmed_authors><pubmed_authors>Giese AK</pubmed_authors><pubmed_authors>Ribases M</pubmed_authors><pubmed_authors>Sivakumaran 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E</pubmed_authors><pubmed_authors>Koblar S</pubmed_authors><pubmed_authors>Biffi A</pubmed_authors><pubmed_authors>Grewal RP</pubmed_authors><pubmed_authors>Segal HC</pubmed_authors><pubmed_authors>Jankowski J</pubmed_authors><pubmed_authors>Ryan KA</pubmed_authors><pubmed_authors>Sudlow CLM</pubmed_authors><pubmed_authors>Thijs V</pubmed_authors><pubmed_authors>Talbert RL</pubmed_authors><pubmed_authors>Seshadri S</pubmed_authors><pubmed_authors>Longstreth WT</pubmed_authors><pubmed_authors>Rosand J</pubmed_authors><pubmed_authors>Lichtner P</pubmed_authors></additional><is_claimable>false</is_claimable><name>&lt;i>COL4A2&lt;/i> is associated with lacunar ischemic stroke and deep ICH: Meta-analyses among 21,500 cases and 40,600 controls.</name><description>&lt;h4>Objective&lt;/h4>To determine whether common variants in familial cerebral small vessel disease (SVD) genes confer risk of sporadic cerebral SVD.&lt;h4>Methods&lt;/h4>We meta-analyzed genotype data from individuals of European ancestry to determine associations of common single nucleotide polymorphisms (SNPs) in 6 familial cerebral SVD genes (&lt;i>COL4A1&lt;/i>, &lt;i>COL4A2&lt;/i>, &lt;i>NOTCH3&lt;/i>, &lt;i>HTRA1&lt;/i>, &lt;i>TREX1&lt;/i>, and &lt;i>CECR1&lt;/i>) with intracerebral hemorrhage (ICH) (deep, lobar, all; 1,878 cases, 2,830 controls) and ischemic stroke (IS) (lacunar, cardioembolic, large vessel disease, all; 19,569 cases, 37,853 controls). We applied data quality filters and set statistical significance thresholds accounting for linkage disequilibrium and multiple testing.&lt;h4>Results&lt;/h4>A locus in &lt;i>COL4A2&lt;/i> </description><dates><release>2017-01-01T00:00:00Z</release><publication>2017 Oct</publication><modification>2026-04-29T09:03:41.108Z</modification><creation>2019-03-27T00:03:40Z</creation></dates><accession>S-EPMC5664302</accession><cross_references><pubmed>28954878</pubmed><doi>10.1212/WNL.0000000000004560</doi><doi>10.1212/wnl.0000000000004560</doi></cross_references></HashMap>