{"database":"biostudies-literature","file_versions":[],"scores":null,"additional":{"submitter":["Moretti R"],"funding":["National Institutes of Health","NIGMS NIH HHS","NIH HHS"],"pagination":["259-268"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/S-EPMC5734271"],"repository":["biostudies-literature"],"omics_type":["Unknown"],"volume":["27(1)"],"pubmed_abstract":["The Rosetta molecular modeling software package provides a large number of experimentally validated tools for modeling and designing proteins, nucleic acids, and other biopolymers, with new protocols being added continually. While freely available to academic users, external usage is limited by the need for expertise in the Unix command line environment. To make Rosetta protocols available to a wider audience, we previously created a web server called Rosetta Online Server that Includes Everyone (ROSIE), which provides a common environment for hosting web-accessible Rosetta protocols. Here we describe a simplification of the ROSIE protocol specification format, one that permits easier implementation of Rosetta protocols. Whereas the previous format required creating multiple separate files"],"journal":["Protein science : a publication of the Protein Society"],"pubmed_title":["Web-accessible molecular modeling with Rosetta: The Rosetta Online Server that Includes Everyone (ROSIE)."],"pmcid":["PMC5734271"],"funding_grant_id":["R01 GM078221","S10 OD023680","R01-GM073151","R35 GM122579","R01 GM073151"],"pubmed_authors":["Das R","Moretti R","Meiler J","Gray JJ","Lyskov S"],"additional_accession":[]},"is_claimable":false,"name":"Web-accessible molecular modeling with Rosetta: The Rosetta Online Server that Includes Everyone (ROSIE).","description":"The Rosetta molecular modeling software package provides a large number of experimentally validated tools for modeling and designing proteins, nucleic acids, and other biopolymers, with new protocols being added continually. While freely available to academic users, external usage is limited by the need for expertise in the Unix command line environment. To make Rosetta protocols available to a wider audience, we previously created a web server called Rosetta Online Server that Includes Everyone (ROSIE), which provides a common environment for hosting web-accessible Rosetta protocols. Here we describe a simplification of the ROSIE protocol specification format, one that permits easier implementation of Rosetta protocols. Whereas the previous format required creating multiple separate files","dates":{"release":"2018-01-01T00:00:00Z","publication":"2018 Jan","modification":"2025-04-19T18:42:15.253Z","creation":"2019-03-26T22:26:17Z"},"accession":"S-EPMC5734271","cross_references":{"pubmed":["28960691"],"doi":["10.1002/pro.3313"]}}