{"database":"biostudies-literature","file_versions":[],"scores":null,"additional":{"omics_type":["Unknown"],"volume":["19(1)"],"submitter":["Lee SS"],"pubmed_abstract":["<h4>Introduction</h4>High-throughput RNA sequencing (RNA-Seq) studies demonstrate that Alter-native Splicing (AS) is a widespread mechanism that enhances transcriptome diversity, particularly in plants exposed to environmental stress. In an attempt to determine the transcriptome and AS patterns of cabbage inbred line \"HO\" under Heat Stress (HS), RNA-Seq was carried out using HS-treated and con-trol samples. Genome-wide analysis indicated that AS is differentially regulated in response to HS. The number of AS events markedly increased in HS-treated samples compared to the control.<h4>Conclusion</h4>We identified 1,864 genes, including Heat shock transcription factor (Hsf) and heat shock protein (Hsp) genes, that exhibited >4-fold changes in expression upon exposure to HS. The enriched Gene "],"journal":["Current genomics"],"pagination":["12-20"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/S-EPMC5817872"],"repository":["biostudies-literature"],"pubmed_title":["Genome-wide Analysis of Alternative Splicing in An Inbred Cabbage (<i>Brassica oleracea</i> L.) Line 'HO' in Response to Heat Stress."],"pmcid":["PMC5817872"],"pubmed_authors":["Cho HS","Lee A","Park HJ","Kwon SY","Kim HS","Lee SS","Jung WY"],"additional_accession":[]},"is_claimable":false,"name":"Genome-wide Analysis of Alternative Splicing in An Inbred Cabbage (<i>Brassica oleracea</i> L.) Line 'HO' in Response to Heat Stress.","description":"<h4>Introduction</h4>High-throughput RNA sequencing (RNA-Seq) studies demonstrate that Alter-native Splicing (AS) is a widespread mechanism that enhances transcriptome diversity, particularly in plants exposed to environmental stress. In an attempt to determine the transcriptome and AS patterns of cabbage inbred line \"HO\" under Heat Stress (HS), RNA-Seq was carried out using HS-treated and con-trol samples. Genome-wide analysis indicated that AS is differentially regulated in response to HS. The number of AS events markedly increased in HS-treated samples compared to the control.<h4>Conclusion</h4>We identified 1,864 genes, including Heat shock transcription factor (Hsf) and heat shock protein (Hsp) genes, that exhibited >4-fold changes in expression upon exposure to HS. The enriched Gene ","dates":{"release":"2018-01-01T00:00:00Z","publication":"2018 Jan","modification":"2025-04-19T13:16:13.326Z","creation":"2019-03-26T23:43:22Z"},"accession":"S-EPMC5817872","cross_references":{"pubmed":["29491729"],"doi":["10.2174/1389202918666170705151901"]}}