{"database":"biostudies-literature","file_versions":[],"scores":null,"additional":{"submitter":["Arias RS"],"funding":["USDA-ARS"],"pagination":["11400-17"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/S-EPMC6272672"],"repository":["biostudies-literature"],"omics_type":["Unknown"],"volume":["20(6)"],"pubmed_abstract":["Pouteria sapota is known for its edible fruits that contain unique carotenoids, as well as for its fungitoxic, anti-inflammatory and anti-oxidant activity. However, its genetics is mostly unknown, including aspects about its genetic diversity and domestication process. We did high-throughput sequencing of microsatellite-enriched libraries of P. sapota, generated 5223 contig DNA sequences, 1.8 Mbp, developed 368 microsatellites markers and tested them on 29 individuals from 10 populations (seven wild, three cultivated) from Mexico, its putative domestication center. Gene ontology BLAST analysis of the DNA sequences containing microsatellites showed potential association to physiological functions. Genetic diversity was slightly higher in cultivated than in the wild gene pool (HE = 0.41 and "],"journal":["Molecules (Basel, Switzerland)"],"pubmed_title":["Development of a Large Set of Microsatellite Markers in Zapote Mamey (Pouteria sapota (Jacq.) H.E. Moore & Stearn) and Their Potential Use in the Study of the Species."],"pmcid":["PMC6272672"],"funding_grant_id":["6402-21310-004-00, 6635-21000-051-00 and 6604-13210-005-02"],"pubmed_authors":["Martinez-Castillo J","Blancarte-Jasso NH","Simpson SA","Scheffler BE","Sobolev VS","Ballard LL","Liu XF","Irish BM","Arias RS","Duke MV"],"additional_accession":[]},"is_claimable":false,"name":"Development of a Large Set of Microsatellite Markers in Zapote Mamey (Pouteria sapota (Jacq.) H.E. Moore & Stearn) and Their Potential Use in the Study of the Species.","description":"Pouteria sapota is known for its edible fruits that contain unique carotenoids, as well as for its fungitoxic, anti-inflammatory and anti-oxidant activity. However, its genetics is mostly unknown, including aspects about its genetic diversity and domestication process. We did high-throughput sequencing of microsatellite-enriched libraries of P. sapota, generated 5223 contig DNA sequences, 1.8 Mbp, developed 368 microsatellites markers and tested them on 29 individuals from 10 populations (seven wild, three cultivated) from Mexico, its putative domestication center. Gene ontology BLAST analysis of the DNA sequences containing microsatellites showed potential association to physiological functions. Genetic diversity was slightly higher in cultivated than in the wild gene pool (HE = 0.41 and ","dates":{"release":"2015-01-01T00:00:00Z","publication":"2015 Jun","modification":"2026-07-16T16:35:49.151Z","creation":"2019-03-26T22:27:11Z"},"accession":"S-EPMC6272672","cross_references":{"pubmed":["26111173"],"doi":["10.3390/molecules200611400"]}}