<HashMap><database>biostudies-literature</database><scores/><additional><omics_type>Unknown</omics_type><volume>7</volume><submitter>Khatun M</submitter><pubmed_abstract>We have developed an algorithm to automatically build the global minimum and other low-energy minima of nanoclusters. This method is implemented in PyAR (https://github.com/anooplab/pyar) program. The global optimization in PyAR involves two parts, generation of several trial geometries and gradient-based local optimization of the trial geometries. While generating the trial geometries, a Tabu list is used for storing the information of the already used trial geometries to avoid using the similar trial geometries. In this recursive algorithm, an n-sized cluster is built from the geometries of n-1 clusters. The overall procedure automatically generates many unique minimum energy geometries of clusters with size from 2 up to n using this evolutionary growth strategy. We have used our strateg</pubmed_abstract><journal>Frontiers in chemistry</journal><pagination>644</pagination><full_dataset_link>https://www.ebi.ac.uk/biostudies/studies/S-EPMC6776882</full_dataset_link><repository>biostudies-literature</repository><pubmed_title>A Global Optimizer for Nanoclusters.</pubmed_title><pmcid>PMC6776882</pmcid><pubmed_authors>Khatun M</pubmed_authors><pubmed_authors>Majumdar RS</pubmed_authors><pubmed_authors>Anoop A</pubmed_authors></additional><is_claimable>false</is_claimable><name>A Global Optimizer for Nanoclusters.</name><description>We have developed an algorithm to automatically build the global minimum and other low-energy minima of nanoclusters. This method is implemented in PyAR (https://github.com/anooplab/pyar) program. The global optimization in PyAR involves two parts, generation of several trial geometries and gradient-based local optimization of the trial geometries. While generating the trial geometries, a Tabu list is used for storing the information of the already used trial geometries to avoid using the similar trial geometries. In this recursive algorithm, an n-sized cluster is built from the geometries of n-1 clusters. The overall procedure automatically generates many unique minimum energy geometries of clusters with size from 2 up to n using this evolutionary growth strategy. We have used our strateg</description><dates><release>2019-01-01T00:00:00Z</release><publication>2019</publication><modification>2025-04-04T08:30:20.019Z</modification><creation>2019-10-18T07:03:03Z</creation></dates><accession>S-EPMC6776882</accession><cross_references><pubmed>31612127</pubmed><doi>10.3389/fchem.2019.00644</doi></cross_references></HashMap>