{"database":"biostudies-literature","file_versions":[],"scores":null,"additional":{"submitter":["Torres P"],"funding":["Generalitat de Catalunya","MINECO","Doctoral National Program","FEDER","CORFO","CONICYT","Reference Network in Biotechnology"],"pagination":["e00103"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/S-EPMC6838487"],"repository":["biostudies-literature"],"omics_type":["Unknown"],"volume":["9"],"pubmed_abstract":["<i>Pichia pastoris</i> is recognized as a biotechnological workhorse for recombinant protein expression. The metabolic performance of this microorganism depends on genetic makeup and culture conditions, amongst which the specific growth rate and oxygenation level are critical. Despite their importance, only their individual effects have been assessed so far, and thus their combined effects and metabolic consequences still remain to be elucidated. In this work, we present a comprehensive framework for revealing high-order (i.e., individual and combined) metabolic effects of the above parameters in glucose-limited continuous cultures of <i>P. pastoris</i>, using thaumatin production as a case study. Specifically, we employed a rational experimental design to calculate statistically significa"],"journal":["Metabolic engineering communications"],"pubmed_title":["Contextualized genome-scale model unveils high-order metabolic effects of the specific growth rate and oxygenation level in recombinant <i>Pichia pastoris</i>."],"pmcid":["PMC6838487"],"funding_grant_id":["21140759","11CEII-9568","2014-SGR-452","CTQ2016-74959-R"],"pubmed_authors":["Ferrer P","Agosin E","Saa PA","Torres P","Albiol J"],"additional_accession":[]},"is_claimable":false,"name":"Contextualized genome-scale model unveils high-order metabolic effects of the specific growth rate and oxygenation level in recombinant <i>Pichia pastoris</i>.","description":"<i>Pichia pastoris</i> is recognized as a biotechnological workhorse for recombinant protein expression. The metabolic performance of this microorganism depends on genetic makeup and culture conditions, amongst which the specific growth rate and oxygenation level are critical. Despite their importance, only their individual effects have been assessed so far, and thus their combined effects and metabolic consequences still remain to be elucidated. In this work, we present a comprehensive framework for revealing high-order (i.e., individual and combined) metabolic effects of the above parameters in glucose-limited continuous cultures of <i>P. pastoris</i>, using thaumatin production as a case study. Specifically, we employed a rational experimental design to calculate statistically significa","dates":{"release":"2019-01-01T00:00:00Z","publication":"2019 Dec","modification":"2026-04-07T13:56:30.048Z","creation":"2020-05-21T18:35:33Z"},"accession":"S-EPMC6838487","cross_references":{"pubmed":["31720218"],"doi":["10.1016/j.mec.2019.e00103"]}}