<HashMap><database>biostudies-literature</database><scores/><additional><submitter>Kampf LL</submitter><funding>National Eye Institute</funding><funding>Deutsche Forschungsgemeinschaft</funding><funding>NIDDK NIH HHS</funding><funding>National Heart, Lung, and Blood Institute</funding><funding>NHGRI NIH HHS</funding><funding>National Institutes of Health</funding><funding>National Human Genome Research Institute</funding><funding>NIH HHS</funding><pagination>2338-2353</pagination><full_dataset_link>https://www.ebi.ac.uk/biostudies/studies/S-EPMC6900796</full_dataset_link><repository>biostudies-literature</repository><omics_type>Unknown</omics_type><volume>30(12)</volume><pubmed_abstract>&lt;h4>Background&lt;/h4>Mutations in about 50 genes have been identified as monogenic causes of nephrotic syndrome, a frequent cause of CKD. These genes delineated the pathogenetic pathways and rendered significant insight into podocyte biology.&lt;h4>Methods&lt;/h4>We used whole-exome sequencing to identify novel monogenic causes of steroid-resistant nephrotic syndrome (SRNS). We analyzed the functional significance of an SRNS-associated gene &lt;i>in vitro&lt;/i> and in podocyte-like &lt;i>Drosophila&lt;/i> nephrocytes.&lt;h4>Results&lt;/h4>We identified hemizygous missense mutations in the gene &lt;i>TBC1D8B&lt;/i> in five families with nephrotic syndrome. Coimmunoprecipitation assays indicated interactions between TBC1D8B and active forms of RAB11. Silencing &lt;i>TBC1D8B&lt;/i> in HEK293T cells increased basal autophagy and exocytosis, two cellular functions that are independently regulated by RAB11. This suggests that TBC1D8B plays a regulatory role by inhibiting endogenous RAB11. Coimmunoprecipitation assays showed TBC1D8B also interacts with the slit diaphragm protein nephrin, and colocalizes with it in immortalized cell lines. Overexpressed murine &lt;i>Tbc1d8b&lt;/i> with patient-derived mutations had lower affinity for endogenous RAB11 and nephrin compared with wild-type Tbc1d8b protein. Knockdown of &lt;i>Tbc1d8b&lt;/i> in &lt;i>Drosophila&lt;/i> impaired function of the podocyte-like nephrocytes, and caused mistrafficking of Sns, the &lt;i>Drosophila&lt;/i> ortholog of nephrin. Expression of &lt;i>Rab11&lt;/i> RNAi in nephrocytes entailed defective delivery of slit diaphragm protein to the membrane, whereas &lt;i>RAB11&lt;/i> overexpression revealed a partial phenotypic overlap to &lt;i>Tbc1d8b&lt;/i> loss of function.&lt;h4>Conclusions&lt;/h4>Novel mutations in &lt;i>TBC1D8B&lt;/i> are monogenic causes of SRNS. This gene inhibits RAB11. Our findings suggest that RAB11-dependent vesicular nephrin trafficking plays a role in the pathogenesis of nephrotic syndrome.</pubmed_abstract><journal>Journal of the American Society of Nephrology : JASN</journal><pubmed_title>&lt;i>TBC1D8B&lt;/i> Mutations Implicate RAB11-Dependent Vesicular Trafficking in the Pathogenesis of Nephrotic Syndrome.</pubmed_title><pmcid>PMC6900796</pmcid><funding_grant_id>DK007527</funding_grant_id><funding_grant_id>DK076683</funding_grant_id><funding_grant_id>R01 DK076683</funding_grant_id><funding_grant_id>U54HG006504</funding_grant_id><funding_grant_id>S10 OD018521</funding_grant_id><funding_grant_id>KIDGEM 1140</funding_grant_id><funding_grant_id>U54 HG006504</funding_grant_id><funding_grant_id>01GM1515C</funding_grant_id><funding_grant_id>P30 DK079310</funding_grant_id><funding_grant_id>UM1HG008900</funding_grant_id><funding_grant_id>HE 7456/3-1</funding_grant_id><funding_grant_id>Az: 33-7532.20</funding_grant_id><funding_grant_id>RO 4341/2-1</funding_grant_id><funding_grant_id>T32 DK007527</funding_grant_id><funding_grant_id>UM1 HG008900</funding_grant_id><pubmed_authors>Walz G</pubmed_authors><pubmed_authors>Hermle T</pubmed_authors><pubmed_authors>MacArthur DG</pubmed_authors><pubmed_authors>Hildebrandt F</pubmed_authors><pubmed_authors>Onuchic-Whitford AC</pubmed_authors><pubmed_authors>Thunauer R</pubmed_authors><pubmed_authors>Chen M</pubmed_authors><pubmed_authors>Helmstadter M</pubmed_authors><pubmed_authors>Amar A</pubmed_authors><pubmed_authors>Berdeli A</pubmed_authors><pubmed_authors>Schneider R</pubmed_authors><pubmed_authors>Rehm HL</pubmed_authors><pubmed_authors>Romer W</pubmed_authors><pubmed_authors>Bergmann C</pubmed_authors><pubmed_authors>Budde K</pubmed_authors><pubmed_authors>Mane S</pubmed_authors><pubmed_authors>Gerstner L</pubmed_authors><pubmed_authors>Loza Munarriz R</pubmed_authors><pubmed_authors>Muller D</pubmed_authors><pubmed_authors>Schrezenmeier E</pubmed_authors><pubmed_authors>Laricchia KM</pubmed_authors><pubmed_authors>Lifton RP</pubmed_authors><pubmed_authors>Kampf LL</pubmed_authors></additional><is_claimable>false</is_claimable><name>&lt;i>TBC1D8B&lt;/i> Mutations Implicate RAB11-Dependent Vesicular Trafficking in the Pathogenesis of Nephrotic Syndrome.</name><description>&lt;h4>Background&lt;/h4>Mutations in about 50 genes have been identified as monogenic causes of nephrotic syndrome, a frequent cause of CKD. These genes delineated the pathogenetic pathways and rendered significant insight into podocyte biology.&lt;h4>Methods&lt;/h4>We used whole-exome sequencing to identify novel monogenic causes of steroid-resistant nephrotic syndrome (SRNS). We analyzed the functional significance of an SRNS-associated gene &lt;i>in vitro&lt;/i> and in podocyte-like &lt;i>Drosophila&lt;/i> nephrocytes.&lt;h4>Results&lt;/h4>We identified hemizygous missense mutations in the gene &lt;i>TBC1D8B&lt;/i> in five families with nephrotic syndrome. Coimmunoprecipitation assays indicated interactions between TBC1D8B and active forms of RAB11. Silencing &lt;i>TBC1D8B&lt;/i> in HEK293T cells increased basal autophagy and exocytosis, two cellular functions that are independently regulated by RAB11. This suggests that TBC1D8B plays a regulatory role by inhibiting endogenous RAB11. Coimmunoprecipitation assays showed TBC1D8B also interacts with the slit diaphragm protein nephrin, and colocalizes with it in immortalized cell lines. Overexpressed murine &lt;i>Tbc1d8b&lt;/i> with patient-derived mutations had lower affinity for endogenous RAB11 and nephrin compared with wild-type Tbc1d8b protein. Knockdown of &lt;i>Tbc1d8b&lt;/i> in &lt;i>Drosophila&lt;/i> impaired function of the podocyte-like nephrocytes, and caused mistrafficking of Sns, the &lt;i>Drosophila&lt;/i> ortholog of nephrin. Expression of &lt;i>Rab11&lt;/i> RNAi in nephrocytes entailed defective delivery of slit diaphragm protein to the membrane, whereas &lt;i>RAB11&lt;/i> overexpression revealed a partial phenotypic overlap to &lt;i>Tbc1d8b&lt;/i> loss of function.&lt;h4>Conclusions&lt;/h4>Novel mutations in &lt;i>TBC1D8B&lt;/i> are monogenic causes of SRNS. This gene inhibits RAB11. Our findings suggest that RAB11-dependent vesicular nephrin trafficking plays a role in the pathogenesis of nephrotic syndrome.</description><dates><release>2019-01-01T00:00:00Z</release><publication>2019 Dec</publication><modification>2024-10-15T09:12:28.765Z</modification><creation>2021-02-20T02:48:23Z</creation></dates><accession>S-EPMC6900796</accession><cross_references><pubmed>31732614</pubmed><doi>10.1681/ASN.2019040414</doi><doi>10.1681/asn.2019040414</doi></cross_references></HashMap>