{"database":"biostudies-literature","file_versions":[],"scores":null,"additional":{"submitter":["Yin X"],"funding":["the key program of Research on modernization of Traditional Chinese Medicine"],"pagination":["18"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/S-EPMC7020376"],"repository":["biostudies-literature"],"omics_type":["Unknown"],"volume":["15"],"pubmed_abstract":["<h4>Background</h4>Many species of the genus <i>Rosa</i> have been used as ornamental plants and traditional medicines. However, industrial development of roses is hampered due to highly divergent characteristics.<h4>Methods</h4>We analyzed the chloroplast (cp) genomes of <i>Rosa laevigata, R. rugosa</i> and <i>R. canina</i>, including the repeat sequences, inverted-repeat (IR) contractions and expansions, and mutation sites.<h4>Results</h4>The size of the cp genome of <i>R. laevigata, R. rugosa</i> and <i>R. canina</i> was between 156 333 bp and 156 533 bp, and contained 113 genes (30 tRNA genes, 4 rRNA genes and 79 protein-coding genes). The regions with a higher degree of variation were screened out (trnH-GUU, <i>trnS</i>-<i>GCU</i>, <i>trnG</i>-<i>GCC</i>, <i>psbA</i>-<i>trnH</i>, <i>t"],"journal":["Chinese medicine"],"pubmed_title":["The chloroplasts genomic analyses of <i>Rosa laevigata, R. rugosa</i> and <i>R. canina</i>."],"pmcid":["PMC7020376"],"funding_grant_id":["2017YFC1702100"],"pubmed_authors":["Liang C","Yin X","Liao B","Pei J","Guo S","Chen S","Xu J"],"additional_accession":[]},"is_claimable":false,"name":"The chloroplasts genomic analyses of <i>Rosa laevigata, R. rugosa</i> and <i>R. canina</i>.","description":"<h4>Background</h4>Many species of the genus <i>Rosa</i> have been used as ornamental plants and traditional medicines. However, industrial development of roses is hampered due to highly divergent characteristics.<h4>Methods</h4>We analyzed the chloroplast (cp) genomes of <i>Rosa laevigata, R. rugosa</i> and <i>R. canina</i>, including the repeat sequences, inverted-repeat (IR) contractions and expansions, and mutation sites.<h4>Results</h4>The size of the cp genome of <i>R. laevigata, R. rugosa</i> and <i>R. canina</i> was between 156 333 bp and 156 533 bp, and contained 113 genes (30 tRNA genes, 4 rRNA genes and 79 protein-coding genes). The regions with a higher degree of variation were screened out (trnH-GUU, <i>trnS</i>-<i>GCU</i>, <i>trnG</i>-<i>GCC</i>, <i>psbA</i>-<i>trnH</i>, <i>t","dates":{"release":"2020-01-01T00:00:00Z","publication":"2020","modification":"2025-04-27T03:49:34.589Z","creation":"2020-05-22T10:47:34Z"},"accession":"S-EPMC7020376","cross_references":{"pubmed":["32082412"],"doi":["10.1186/s13020-020-0298-x"]}}