<HashMap><database>biostudies-literature</database><scores/><additional><omics_type>Unknown</omics_type><volume>36(4)</volume><submitter>Goljan Geremek A</submitter><pubmed_abstract>&lt;h4>Introduction&lt;/h4>Methotrexate therapy improves lung function in selected sarcoidosis patients. Variation in TNF gene was associated with response to treatment. &lt;i>Aim:&lt;/i> To determine the predictive role of-308 G/A, -857C/T, -863 C/A and -1031 T/C &lt;i>TNF-&lt;/i>α polymorphism in the efficacy of MTX for progressive pulmonary sarcoidosis.&lt;h4>Material and methods&lt;/h4>Twenty-eight sarcoidosis patients treated with MTX (6-24 months) were genotyped for &lt;i>TNF-&lt;/i>α polymorphisms: -1031 T/C, -857C/T, -308 G/A and -863 C/A. Pulmonary function test (PFT) were performed every 6 months to determine treatment response, until the drug withdrawal.&lt;h4>Results&lt;/h4>No correlation between the initial clinical presentation of sarcoidosis and &lt;i>TNF&lt;/i> α polymorphisms was found, neither for every allele nor for combined genotypes distribution. According to PFT evaluation we have discovered 3 types of response to MTX: early (ER), late (LR) and No-response (NR). &lt;i>TNF-&lt;/i>α-308 A allele carriers have got significantly higher chance to be LR, p=0.02, RRI:83%. &lt;i>TNF-&lt;/i>α-308 GG genotype transferred the 3-fold higher probability of early vs late response to MTX, p=0.02. Combined genotyping allowed to distinguish LR from ER and NR groups. ER and NR patients are genetically similar (-857CC-308GG). LR are "genetically" different group of patients (-857C/T-308GG or -857CC-308A/G) with 5-fold greater probability to be LR than &lt;i>TNF-&lt;/i>α-857CC-308GG patients, p=0,005 sensitivity 85%, specificity: 43%, PPV 58%, NPV 75%. &lt;i>TNF-&lt;/i>α&lt;i&gt;-&lt;/i>308GG-857CC patients have significantly lower chance to be LR comparing to other response type p=0.03 OR=0,075 95% CI=0.07-0.08.&lt;h4>Conclusion&lt;/h4>Two types of positive response to MTX therapy (early and late) in chronic respiratory sarcoidosis are associated with polymorphic changes in TNF gene.</pubmed_abstract><journal>Sarcoidosis, vasculitis, and diffuse lung diseases : official journal of WASOG</journal><pagination>261-273</pagination><full_dataset_link>https://www.ebi.ac.uk/biostudies/studies/S-EPMC7247097</full_dataset_link><repository>biostudies-literature</repository><pubmed_title>Methotrexate treatment efficacy in sarcoidosis might be related to TNF-α polymorphism: real life preliminary study.</pubmed_title><pmcid>PMC7247097</pmcid><pubmed_authors>Puscinska E</pubmed_authors><pubmed_authors>Gorecka D</pubmed_authors><pubmed_authors>Demkow U</pubmed_authors><pubmed_authors>Nowinski A</pubmed_authors><pubmed_authors>Czystowska M</pubmed_authors><pubmed_authors>Goljan Geremek A</pubmed_authors><pubmed_authors>Bednarek M</pubmed_authors><pubmed_authors>Sliwinski P</pubmed_authors><pubmed_authors>Skoczylas A</pubmed_authors></additional><is_claimable>false</is_claimable><name>Methotrexate treatment efficacy in sarcoidosis might be related to TNF-α polymorphism: real life preliminary study.</name><description>&lt;h4>Introduction&lt;/h4>Methotrexate therapy improves lung function in selected sarcoidosis patients. Variation in TNF gene was associated with response to treatment. &lt;i>Aim:&lt;/i> To determine the predictive role of-308 G/A, -857C/T, -863 C/A and -1031 T/C &lt;i>TNF-&lt;/i>α polymorphism in the efficacy of MTX for progressive pulmonary sarcoidosis.&lt;h4>Material and methods&lt;/h4>Twenty-eight sarcoidosis patients treated with MTX (6-24 months) were genotyped for &lt;i>TNF-&lt;/i>α polymorphisms: -1031 T/C, -857C/T, -308 G/A and -863 C/A. Pulmonary function test (PFT) were performed every 6 months to determine treatment response, until the drug withdrawal.&lt;h4>Results&lt;/h4>No correlation between the initial clinical presentation of sarcoidosis and &lt;i>TNF&lt;/i> α polymorphisms was found, neither for every allele nor for combined genotypes distribution. According to PFT evaluation we have discovered 3 types of response to MTX: early (ER), late (LR) and No-response (NR). &lt;i>TNF-&lt;/i>α-308 A allele carriers have got significantly higher chance to be LR, p=0.02, RRI:83%. &lt;i>TNF-&lt;/i>α-308 GG genotype transferred the 3-fold higher probability of early vs late response to MTX, p=0.02. Combined genotyping allowed to distinguish LR from ER and NR groups. ER and NR patients are genetically similar (-857CC-308GG). LR are "genetically" different group of patients (-857C/T-308GG or -857CC-308A/G) with 5-fold greater probability to be LR than &lt;i>TNF-&lt;/i>α-857CC-308GG patients, p=0,005 sensitivity 85%, specificity: 43%, PPV 58%, NPV 75%. &lt;i>TNF-&lt;/i>α&lt;i&gt;-&lt;/i>308GG-857CC patients have significantly lower chance to be LR comparing to other response type p=0.03 OR=0,075 95% CI=0.07-0.08.&lt;h4>Conclusion&lt;/h4>Two types of positive response to MTX therapy (early and late) in chronic respiratory sarcoidosis are associated with polymorphic changes in TNF gene.</description><dates><release>2019-01-01T00:00:00Z</release><publication>2019</publication><modification>2024-11-13T11:56:48.852Z</modification><creation>2020-06-03T07:04:10Z</creation></dates><accession>S-EPMC7247097</accession><cross_references><pubmed>32476962</pubmed><doi>10.36141/svdld.v36i4.7708</doi></cross_references></HashMap>