{"database":"biostudies-literature","file_versions":[],"scores":null,"additional":{"omics_type":["Unknown"],"volume":["11"],"submitter":["Rojas-Estevez P"],"pubmed_abstract":["<i>Phytophthora betacei</i> is an oomycete plant pathogen closely related to <i>Phytophthora infestans.</i> It infects tree tomato (<i>Solanum betaceum</i>) in northern South America, but is, under natural conditions, unable to infect potatoes or tomatoes, the main hosts of its sister species <i>P. infestans</i>. We characterized, and compared the effector repertoires of <i>P. betacei</i> and other <i>Phytophthora</i> species. To this end, we used <i>in silico</i> approaches to predict and describe the repertoire of secreted proteins in <i>Phytophthora</i> species and determine unique and core effectors. <i>P. betacei</i> has the largest proteome and secretome of all <i>Phytophthora</i> species evaluated. We identified between 450 and 1933 candidate effector genes in <i>Phytophthora ramoru"],"journal":["Frontiers in genetics"],"pagination":["579"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/S-EPMC7295944"],"repository":["biostudies-literature"],"pubmed_title":["Effector Repertoire of <i>Phytophthora betacei</i>: In Search of Possible Virulence Factors Responsible for Its Host Specificity."],"pmcid":["PMC7295944"],"pubmed_authors":["Bernal AJ","Ayala-Usma DA","Rojas-Estevez P","Restrepo S","Guayazan-Palacios N","Cardenas M","Urbina-Gomez DA","Mideros MF"],"additional_accession":[]},"is_claimable":false,"name":"Effector Repertoire of <i>Phytophthora betacei</i>: In Search of Possible Virulence Factors Responsible for Its Host Specificity.","description":"<i>Phytophthora betacei</i> is an oomycete plant pathogen closely related to <i>Phytophthora infestans.</i> It infects tree tomato (<i>Solanum betaceum</i>) in northern South America, but is, under natural conditions, unable to infect potatoes or tomatoes, the main hosts of its sister species <i>P. infestans</i>. We characterized, and compared the effector repertoires of <i>P. betacei</i> and other <i>Phytophthora</i> species. To this end, we used <i>in silico</i> approaches to predict and describe the repertoire of secreted proteins in <i>Phytophthora</i> species and determine unique and core effectors. <i>P. betacei</i> has the largest proteome and secretome of all <i>Phytophthora</i> species evaluated. We identified between 450 and 1933 candidate effector genes in <i>Phytophthora ramoru","dates":{"release":"2020-01-01T00:00:00Z","publication":"2020","modification":"2026-04-07T17:23:54.453Z","creation":"2020-07-01T07:08:25Z"},"accession":"S-EPMC7295944","cross_references":{"pubmed":["32582295"],"doi":["10.3389/fgene.2020.00579"]}}